Salvelinus namaycush (lake trout): 120023000
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Entry
120023000 CDS
T07522
Name
(RefSeq) thyrotropin receptor-like
KO
K04249
thyrotropin receptor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120023000
04081 Hormone signaling
120023000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120023000
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Peptide
Thyrotropin
120023000
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
LRR_8
LRR_5
Motif
Other DBs
NCBI-GeneID:
120023000
NCBI-ProteinID:
XP_038822880
UniProt:
A0A8U0PDP1
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Position
Sna28:complement(5502289..5568084)
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AA seq
1106 aa
AA seq
DB search
MDAALPWKQGEQCSLAVTGLSGYYQCSLAVTGPPGYYQCSLAVTGLSGYYQCSPAVSGLS
GYYQYSLAVTGLSGYYQCSLAVTGLSGYYQCSLAVTGLSGYYQCSRAVTGLSGYYQCSLA
VTGLSGYYQCSLAVTGLSGYYQCSLAVTGLSVYYQCSLAVTGLSGYYQCSLAVNGLSGYY
QCSLAVTGLSGYYQCSLAVTGLSGYYQCSLAVTGLSGYYQCSLAVTGLSGYYQCSLAVTG
LSGYYQCSLAVTGLSGYYQCSLAVTGLSGYYQCSLAVTGFYGYYQCSLAVTGLSGYYQCS
LAVTGLSGYYQCSLAVTGLSGYYQCYSVEIRSIRSLSYIDPEAFKDLTNLKYLGIFNTGL
PSFPALGQIRSSQDDFILEIVDNLFIREIPANSFNGISENEITLMLNSNGLTDIHPYAFN
GTRLEEVYLYRNVDLVRLDEKTFSGVISGPTLLDVSESRVNSLPTMGLEAVQKLKAKNTW
ALKKLPPLRAFQHLQSAELTYPSHCCGLSKVKRRRGHVESVICNLTSSTRRQRSTRPSGN
PSEAYERQHPEHPHPTSSNPSPRDSQHHHPTRSSPSHRDTQHLHPTSSNLSPRDPQHHHP
TRSSPSPRDPQHHHPTRSSPSPRDPQHHHPTSSSPSPRDTQHHHPTSSSPSPRDPQHLHP
TSSSPSPRDPQHHHPTSSSPSPRDPQHLHPTSSSPSPRDPQHLHPNSSSPYPYDYQYYYD
NYSCPPSGKCFYIVFPTEGPDEGFDYTVCDDDREDQGVPCTPLPDAFNPCEDVMSLGFLR
VSVWLVSLLAVLANLLVLFILLTSHYKLTITRFLLCNLAMADLFMGVYLLLIASVDLYTR
SQYHHYAIDWQTGAGCQLAGVLTVFASELSVYTLTAITLQRWHAITFAMRPERKVRLRHI
VVLMLAGWLLCLVLAVLPLAGVSSYQRVSICLPMDTDSTAAMVYVVTLLMLNVLAFVLVS
VCYVHIYCMVHNPQHPSSQGDASMAKRMAVLIFTNFLCLAPISFYGLSAALHHPLITVTD
SKVLLVLFYPLNSCANPFLYGILTRAFHGDVLILLSRLGLCQRQAQLFRGAQSDVGSPAG
GKMRQGVPCLGAHIPQILELRKRQRP
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggacgctgctctaccatggaaacaaggagagcagtgctccctagcagtcactgggctc
tctggttactaccagtgttctctagcagtcactgggccccctggctactaccagtgctct
ctagcagtcactggtctctctggttactaccagtgctccccagcagtcagtgggctctct
ggttactaccagtactctctagcagtcactggactctctggttactaccagtgctctcta
gcagtcactgggctctctggttactaccagtgctctctagcagtcactggactctctggt
tactaccagtgctctcgagcagtcactgggctctctggttactaccagtgctctctagca
gtcactgggctctctggttactaccagtgctccctagcagtcactgggctctctggttac
taccagtgctctctagcagtcactgggctctctgtttactaccagtgctctctagcagtc
actgggctctctggttactaccagtgctccctagcagtcaatgggctctctggttactac
cagtgctctctagcagtcactggactctctggttactaccagtgctccctagcagtcact
gggctctctggttactaccagtgctctctagcagtcactgggctctctggttactaccag
tgctctctagcagtcactgggctctctggttactaccagtgctctctagcagtcactgga
ctctctggttactaccagtgctctctagcagtgactgggctctctggttactaccagtgc
tctctagcagtcactgggctctctggttactaccagtgctccctagcagtcactgggttc
tatggttactaccagtgctctctagcagtcactggactctctggttactaccagtgctcc
ctagcagtcactgggctctctggttactaccagtgctctctagcagtcactgggctctct
ggttactaccaatgctacagcgtagaaataaggagtatcaggagcctgtcttacattgac
ccagaggcattcaaggacctcacaaacttaaagtacctgggtatcttcaacaccggcctg
ccatccttccctgctctgggccagatccgttccagccaggacgacttcatcttggaaatt
gtggataacctcttcatcagagaaattcctgccaactcattcaatgggatctcagagaat
gaaatcaccctgatgttgaacagcaacggtctgacggacatccatccctacgccttcaat
ggaaccagactggaggaagtgtacctctataggaatgtggatctggtgcggttggacgag
aagacattttctggcgtgatcagcgggccaactcttctagacgtttccgaatcaagggtg
aattccttacccacaatgggtctggaggctgttcaaaaactgaaagctaaaaacacttgg
gccctcaagaaactaccccccctgagggccttccagcatctgcagagtgctgagctcacc
taccccagtcactgctgtggactgagcaaagtgaagaggaggagaggacacgtggagtcc
gtcatttgcaacctgaccagctctacaagacgacagcgatcaactaggccctctggaaac
ccctctgaggcctacgagaggcagcaccccgaacaccctcatcccaccagcagcaacccc
tccccccgagacagccagcaccatcatcccaccagaagcagcccctcccaccgagacacc
cagcacctccatcccaccagcagcaacctctccccccgagacccccagcaccatcatccc
accagaagtagcccctccccccgagacccccagcaccatcatcccaccagaagtagcccc
tccccccgagacccccagcaccatcatcccaccagcagcagcccctccccccgagacacc
cagcaccatcatcccaccagcagcagcccctccccccgagacccccagcacctccatccc
accagcagcagcccctccccccgagacccccagcaccatcatcccaccagcagcagcccc
tccccccgagacccccagcacctccatcccaccagcagcagcccctccccccgagacccc
cagcacctccatcccaacagcagcagcccctacccctacgactaccagtactactacgat
aactacagctgtcccccctccggtaagtgcttctacatagtgttccctacggagggccca
gacgaaggctttgactacaccgtgtgcgatgatgacagggaggaccagggggtcccctgc
acccctctgcccgatgccttcaacccctgtgaggacgtgatgagcctgggcttcctgcgg
gtgtctgtttggctggttagcttgctagccgttctggctaacctcttggtcctgttcatc
ctgctgaccagccactacaaactgaccatcacccgcttcctcctgtgcaacctggccatg
gcagatctcttcatgggcgtgtacctcttgctcatcgcgtctgtggacctctacacgcgc
tcccagtaccaccactacgccattgactggcagactggtgccggatgccaactggctggg
gtgctcacagtgttcgccagcgagctgtcagtctacacgctgaccgccattactcttcag
cgctggcacgccatcaccttcgccatgaggcccgagaggaaagtgcgactacgccacata
gtggtgctaatgctagccggatggctgctgtgccttgtgttagctgtgctaccgctagct
ggcgttagcagctaccagagggttagcatctgcttgcccatggacacagactcaaccgcg
gccatggtctacgtggtcaccctgctaatgctgaacgtgctcgcattcgtgttggtgagc
gtgtgctacgtacacatctactgcatggtgcacaacccacagcacccgtcgagtcaaggg
gacgccagcatggccaaacgcatggccgtgcttatcttcaccaatttcctgtgtctggca
cccatctccttctatggcctgtctgctgcgctgcaccacccactcatcaccgtcaccgac
tccaaggtgctgctggtgctattttaccctttgaactcgtgtgccaaccccttcctgtac
ggtatcctgacgcgagccttccacggggacgttctgattctgctgagccgcttggggctg
tgtcaacgtcaggcccagctcttccgaggagcgcagtccgacgtgggcagccccgctggg
ggcaagatgcgccaaggggttccctgtcttggtgcccacataccccagatcctggagctc
cgcaagaggcagagaccgtaa
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