Salvelinus namaycush (lake trout): 120023871
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Entry
120023871 CDS
T07522
Name
(RefSeq) dermatan-sulfate epimerase-like
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120023871
Enzymes [BR:
snh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
120023871
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Paralog
GFIT
Motif
Pfam:
DSE-like_N
GldM_1st
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
120023871
NCBI-ProteinID:
XP_038823899
UniProt:
A0A8U0TP42
LinkDB
All DBs
Position
29:24547816..24575529
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AA seq
959 aa
AA seq
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MRTYTRGAPTAFFISLLWPLVSPVVGMGEETDPTGGIPFMGGNYDGHPMLFFGQGEVEEL
QAAAAGTHQEMAARIREAGEAMLEHPEEYLPSWSPAEFSARWNEVYGNNLGVLSMFCLLY
PHRAGALDLAKDYMERMAAQPSWLVKDAPWDEVPLAHSLVGFATAYDFLYEYLSKVQQER
FLRVIGNATRFMYEKSYIRGWGFQYLHNHQPTNCVALLTGSLVYMAQGYLQEAYLWTKQV
LAIMEKSMVLLQDVTDGSLYEGVAYGTYTTRSLFQYMFLVQRHFSISHFDHPWLHKHFAF
MYRTILPGFQRTVAVADSNYNWFYGPESQLVFLDRYVMRNGSGNWLAELIHQNRVLEGPG
QAGKGQRWCTLHTEFIWYDPSLTPRAPADFGTSQLHYFEDWGVVTYGSALPADTNHTFLS
FKSGKLGGQAIFDIVHRNKYKDWIKGWRNFNAGHEHPDQNTFTFAPNGVPFITEALYGPK
YTFLNNAVLFSPAVSRSCFKPWEGQVTEACDSKWLKYKVGLAADAQGRVEAALERQGMVF
IRGEGQSAYNPDLKIRSFQRNLLLLHPQLLVLVDHIHLETDSPTRAMSAFFHNTDLSFQE
AKIDGVHGAFVRHGEDPYKMFWMDDRGFSEKGVLGYWNYPRGYPYNGSNYVNVTMPLRYP
HTRVAYIFFGPGVDVQSFSLRADANRVDIYLATNEHTYTIYLLTGEVTNKPLFAMVLVDQ
KKIVFEKAAGVLNDTPEEVEEYVNVVEDNLQHAKPVFQQLERHILGRVLNTASFRKTAER
LLQFSDKKKTEEAIEKMFALTKKQGKGKGAKKALGNLGKELSESLPDIFAQIEVSEKKER
SKSTKRIIEESSEEDGDSRAFMDYGDSNKGRKGGFVKGRKFKEVHMSATAKSDSLSNAAS
YIRLFLILNIATFFLLLAVLLTRFQRGRSLHTQRCFYGILLIDSFILLCLYSSCSRAQC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgaggacctacaccagaggggcccccacagcgttcttcataagtctactgtggcccctg
gtgtccccagtggtggggatgggagaggagacggaccccactggagggatacccttcatg
ggagggaactacgatggacaccccatgctgtttttcggccagggtgaggtggaggagttg
caggcagcagcggctgggactcaccaggagatggctgcaaggatccgcgaggcgggggag
gccatgctggagcaccctgaggaatacctgccctcctggagcccggcagagttcagcgcc
cgctggaacgaggtgtatggaaacaacctgggagtgttgtctatgttctgtctgctctac
ccacacagggccggggcccttgacctggccaaggattacatggagaggatggcagctcag
cctagttggttggttaaagatgctccttgggatgaggttcctctagcccactctctggtt
ggcttcgctacagcctatgacttcctgtatgagtacctgagcaaggtgcagcaggagcgc
ttcctgcgggtgatcggtaatgctacgcgcttcatgtatgagaagtcctacatccgcggc
tggggcttccagtacctgcacaaccaccagcccaccaactgtgtggctctcctcactggc
agcctggtctacatggcccagggttatctgcaggaggcctacctgtggactaagcaggtt
ctggccatcatggagaagtctatggtgctcctccaggacgtgacggacggctcactgtac
gagggcgtggcctacggtacctataccacccgctctctattccagtatatgttcctcgtg
cagagacacttctccatcagccacttcgaccacccctggctccacaaacactttgcattc
atgtacaggaccatcctgccagggttccagaggactgtagccgtagcagattccaactac
aattggttctacgggcctgagagccagttggtgttcctggaccgatacgtgatgaggaac
ggcagcgggaactggctggctgaactgatccatcagaaccgggtgttggaggggccagga
caggccgggaagggacagagatggtgcacactgcacacagagttcatctggtatgatcca
agtctgactcccagggctcctgcagacttcggtacatcccaactccactactttgaggac
tggggggtcgtcacgtatggaagtgctttacccgcagacaccaaccacaccttcctctct
ttcaagtcggggaagctgggtggacaggccatatttgacatcgttcacaggaacaagtac
aaagactggatcaaagggtggcggaactttaacgctggacatgagcaccctgaccagaac
acctttacgttcgcccctaatggtgttccttttatcacggaggctctgtacgggcccaag
tataccttcctcaacaacgcagtgctgttctccccagctgtctcaaggagctgcttcaag
ccatgggaaggtcaggtcaccgaggcctgtgactctaagtggctgaagtacaaggtgggg
ctggcggcggacgcccagggcagggtggaggcggctctggagaggcaggggatggtgttc
atccgtggggagggccagtcggcctacaaccctgacctgaagatcaggagcttccagagg
aacctgctgctcctgcacccccagctgctggtcctagtggatcatatccatctggagaca
gacagcccaaccagggccatgagtgccttcttccacaacacggacctgtcctttcaggaa
gccaaaatagatggtgtgcacggagcctttgtcagacacggtgaagacccgtataaaatg
ttctggatggatgacaggggcttcagtgagaaaggggtcttggggtactggaactatcca
cgtggttacccctataatggctctaactatgtgaatgtgacaatgccactgaggtaccca
cacaccagggtagcctatatcttctttgggccgggggtggacgtgcagagctttagcctg
cgtgctgatgctaatagggtggatatttacctggccaccaacgagcacacctacaccatc
taccttctgacaggagaggtgaccaacaagcctctgttcgccatggtactggtggaccag
aagaagattgtgtttgagaaagcagcaggagtgctgaacgacacgccagaggaggtggag
gagtatgtcaacgtagtagaggacaacctccagcatgccaagcctgttttccagcagctg
gagagacacatcctgggcagggtactcaacacggccagcttccgcaagacagctgagcgc
ctcctacagttctcagacaagaagaagacagaggaggccatcgagaaaatgtttgctctg
actaagaaacagggcaaagggaagggggccaagaaagccttggggaaccttgggaaagag
ctctcagagagcctgcctgacatctttgcacagatcgaggtgagtgagaagaaggagaga
tcgaagagcacaaagcgaattattgaggagagctcagaggaagatggagactccagggcg
tttatggattatggagactcaaataaaggcaggaagggtggctttgtgaagggtcgcaag
ttcaaggaggtccacatgtcagcgacagccaagagtgacagtctgtcaaacgcagcctct
tatatcagactattcctaatcttaaacatagccaccttcttcctgctactggctgtgtta
ttgacacgcttccagagaggcagaagtctacacacccaaaggtgtttctatggcattctc
ctcatcgacagcttcatcttactctgcctctactcttcctgctctcgcgcacagtgttga
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