Salvelinus namaycush (lake trout): 120024578
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Entry
120024578 CDS
T07522
Name
(RefSeq) thrombomodulin-like
KO
K03907
thrombomodulin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
snh04090
]
120024578
00535 Proteoglycans [BR:
snh00535
]
120024578
04091 Lectins [BR:
snh04091
]
120024578
CD molecules [BR:
snh04090
]
Proteins
120024578
Proteoglycans [BR:
snh00535
]
Cell surface proteoglycans
Others
120024578
Lectins [BR:
snh04091
]
C-Type lectins
Others
120024578
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXa_inhibition
cEGF
EGF_CA
EGF
Lectin_C
EGF_Tme5
EGF_3
THBD
Plasmod_Pvs28
ECSCR
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
120024578
NCBI-ProteinID:
XP_038824791
UniProt:
A0A8U0TR62
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Position
Sna29:complement(16321973..16324053)
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AA seq
547 aa
AA seq
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MRDTVGILVALTFLLRVKGEAPRGGYCIEKQCFAVFQDQVDFGTAQKHCEDNNGHNGHLM
TVRSLISHSILLILLGIHTGNYWIGLQLPSGQCPDQALGLRGYRWITGDNETEFQNWGRF
DDVCSSKCISVSKYDFEWKEQPCNSKIDGFICEYKLDSPCQHVMVKGDESVLYDNPLGFK
GDNLLVLPLGTIATLKSLGSKYICHFEQWIQAPWNCEVFNGGCSHDCSSVNHEPVCTCPP
GKTLQDNNVTCEYALNDLCHNSGCAHLCQKKDDSYACMCHHGYALAEDGKECKDIDYCVE
DRQCQGQNMECVNRPTLGGFECKCQKGYELEYDICVDVDECFMGPCDHECTNTIGSYICS
CFDGFISMTEDTNRCQLLCLAEECPTECDRSKTYQCYCPIGYLLDDRNGSSICVDIDECE
MDSYCHHNCTNTYGGYLCSCDEGFDLVGEYDCVDRETSEGSGFTTPYTPNAKHPTERPFT
VKAGGLLGMLVCIVVVILVMVVLIHLILKRRGNLDIAFESQGVGSPDLQQVSTDKYQKLS
FDRHFII
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atgagggatactgtaggaatactcgttgcgttaacattccttttgagagtcaagggagaa
gcccctcgtggcggatactgcatcgagaagcagtgttttgcggttttccaggaccaagtc
gactttggaacggcacaaaaacattgtgaggataataatgggcataatggacatttaatg
acagtgcgatctttgatatcgcatagcatccttttaatattactcggtatccatactgga
aattattggattggtttgcagctaccgagcgggcaatgccccgaccaagcgttgggttta
cgagggtacaggtggataactggagataatgaaacggagttccagaactggggacgcttt
gatgatgtctgctcttcaaaatgcatttcagtatcaaaatacgactttgaatggaaggaa
cagccatgcaacagtaaaatagatggatttatttgtgaatataaacttgacagtccttgc
caacatgtcatggtaaaaggggacgaatccgttctgtacgacaacccattggggttcaag
ggagacaacctactggtattacccctgggaaccattgcaacgctcaaatccctcggatcg
aaatatatatgtcactttgaacagtggatacaagcaccatggaattgcgaggtatttaat
ggtggctgttcgcatgactgttcctcagttaaccatgaacctgtatgcacctgtccacct
ggaaaaactctccaggacaacaacgtcacatgtgaatatgcgctaaatgacctctgccat
aactcagggtgcgcgcatctctgccagaaaaaagatgacagctacgcttgcatgtgtcac
catgggtacgcacttgcagaagatgggaaggagtgcaaagacattgattattgtgtcgag
gatagacagtgccagggacaaaacatggaatgtgtcaataggcctactcttggtggattt
gaatgcaaatgccagaagggatatgagttggaatatgacatatgcgtcgatgtggatgaa
tgcttcatgggtccatgtgaccacgaatgcacgaacacgataggcagttacatttgttcc
tgttttgatggattcatttcaatgacagaagacaccaacaggtgtcaattgctttgttta
gcagaagagtgtcccaccgaatgtgatcgtagtaaaacatatcaatgctactgtccaata
ggttacttactcgatgacagaaatgggtcgtcaatttgtgtcgacatagatgaatgtgag
atggattcttactgccaccataattgcacaaatacttatggaggttacctgtgttcttgt
gacgagggattcgacttggttggtgaatatgattgtgttgacagagaaacatcggagggt
tcaggttttacgacaccatatacaccaaatgccaagcatccaactgagcgccctttcact
gtaaaggcgggaggtcttcttggaatgttagtatgtattgtcgttgttattttggtgatg
gttgtacttattcaccttatactgaaacgtcgaggtaatttagacattgctttcgaaagc
caaggcgttggtagtcccgatttgcagcaagtctcaacggataagtaccaaaaattgtca
tttgacagacattttataatatga
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