Salvelinus namaycush (lake trout): 120025433
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Entry
120025433 CDS
T07522
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00280
Valine, leucine and isoleucine degradation
snh00650
Butanoate metabolism
snh00900
Terpenoid backbone biosynthesis
snh01100
Metabolic pathways
snh03320
PPAR signaling pathway
Module
snh_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
120025433 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
120025433 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120025433 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120025433 (hmgcs1)
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
120025433 (hmgcs1)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
PS_Dcarbxylase
ACP_syn_III
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
120025433
NCBI-ProteinID:
XP_038825878
UniProt:
A0A8U0PJU4
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Position
Sna31:complement(5711234..5725081)
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AA seq
519 aa
AA seq
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MPGSAQANGEATWPKDVGVIALEIYFPSQYVDQAELEQFDGVSAGKYTVGLGQARMGFCS
DREDINSLCLTVVQRLMERNGLSYDQVGRLEVGTETIIDKSKSVKTVVMQLFEESGNTDV
EGIDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGGAGAIAML
VGPNAPLAFDRGLRGTHMQHAYDFYKPDMASEYPVVDGKLSIECYLSALDRCYSVYRNKI
HAQWQREGVDKRFSLEDFGYMVFHSPYCKLVQKSLARLVLSDFLSHPRPNTETGPFSGLE
AFREVKPEETYFNRDVEKAFMKASTEMFDQKTKASLLVSNQNGNMYTPSVYGCLASVIAQ
HTPQHLAGQRIGLFSYGSGFAATLYSLRVSQDATPGSGLDKICASLCDLKARLDSRRKVS
PAMFAENMQLREETHHLAPYVPQGAVEELFHGTWYLTRVDEKHRREYSRCSLNDDLPLEA
GLVNSTTATEHIPSPVKKMPRLPASTAGPEAVTVSNGDH
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgcctggatcagcccaagccaacggcgaggccacgtggcccaaagatgtgggcgtcatc
gccctggagatctacttcccctcacagtacgtggaccaggccgagctggagcagtttgac
ggcgtgtcggccggcaagtacacggtgggcctgggccaggcgcgtatgggcttctgctcg
gaccgcgaggacatcaactccctctgcctgacggtggtccagcggctgatggaaaggaat
ggcctctcctacgaccaggtgggccgtctggaggtgggcactgagaccatcatcgacaag
tccaagtcggtgaagacggtggtgatgcagctgttcgaggaatcgggcaacacggacgtg
gaggggattgacacgaccaacgcttgctatgggggcaccgccgccctcttcaacgccgtc
aactgggtggagtctagctcctgggacggtcgttatgccctggtggtggcaggagacatt
gcagtttacgccacaggaagtgcccggccgacagggggcgccggtgcgatagccatgttg
gtagggcccaacgccccactggcttttgacagaggtctgcggggtacacacatgcagcac
gcctacgacttctacaagccagatatggcgtcagaatatcctgtggtggacggaaagctg
tctatcgagtgctacctcagcgccttagatcgctgttactctgtctatcgcaacaagatc
catgcacagtggcaaagagagggtgtggacaagcgtttcagcctggaggactttggctac
atggtgttccactctccctactgcaagctggtgcagaagtccttagcccgtctggtgctc
agtgacttcctcagccaccccaggcccaacacagagactggaccgttcagtggcctggag
gctttcagggaggtgaagccggaggagacctacttcaacagggatgtggagaaggccttc
atgaaggccagcacagagatgtttgatcaaaagaccaaggcttccctcctcgtctccaac
cagaacggcaacatgtacaccccctctgtctacggctgccttgcttctgtcatcgcacaa
cacacacctcagcacctggcgggccagagaatcggcctgttctcctacggctcagggttt
gccgccacactctattccctccgagtctcccaggacgccacgcctggctctggattggat
aagatctgtgccagcctgtgtgacctcaaggccagactggactccaggagaaaggtgtca
cctgccatgttcgctgaaaacatgcagctgagggaagagacccaccacctagcaccgtac
gtgccccagggcgctgtggaggagctgttccatgggacgtggtatttgacccgggtggac
gaaaagcaccgtcgagagtactccagatgctccctgaacgacgacttgcccctggaggct
ggcctggtcaactccaccacagccactgagcacatcccaagcccagtgaagaagatgccc
cgcctccccgcctccacagctggtcctgaggcggtcaccgttagcaatggggatcattaa
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