Salvelinus namaycush (lake trout): 120026889
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Entry
120026889 CDS
T07522
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
snh04145
Phagosome
snh04218
Cellular senescence
snh04514
Cell adhesion molecules
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120026889
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120026889
04145 Phagosome
120026889
09143 Cell growth and death
04218 Cellular senescence
120026889
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120026889
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120026889
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120026889
Exosome [BR:
snh04147
]
Exosomal proteins
Proteins found in most exosomes
120026889
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Antigens
120026889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
ig
Psg1
Ig_3
Ig_2
C2-set_3
TMEM154
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
120026889
NCBI-ProteinID:
XP_038827549
UniProt:
A0A8U0TTY5
LinkDB
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Position
Sna32:8854973..8857484
Genome browser
AA seq
377 aa
AA seq
DB search
MISFCLLFLWIPITSAAPHSMKYLYTAVSGDTDFPEFMVVGLLDDHQFVYFDSNTKTLGL
TTEWMKKKAGKYYRKLYTEPLINQHEGFKNLITFAKKQFNQTQSKAVHTIQNLYGCEWND
ETELQDYFHHYGYDGEDFISLDMKTVRWITSVQQADTIKQKWDDNSKNLHYLKWYFTKEC
IDTLKKYLNFASSVLKRIVPPSVSLLQKTPSSPVTCHATGFYPSGVTVSWQKDGQEQHED
VLHGEILPNDDGTFQKSAHLTMDCDEWKNNNYTCVVEHKENIIAIRLDQSVIKTNSDKPP
ESGPIIIGVVVAVILLALITIAGFIMWNRKRTVSDDGSNPSMTQQNQIQLEVSLSLIKQV
MREAEKRGPLLKDNETS
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgatttccttctgtctcttgtttctctggattcctataacttctgcagctccccactct
atgaaatacttatacactgcagtctcaggtgatactgacttcccagagttcatggtggtg
ggtttgctggacgatcatcagtttgtgtactttgacagcaacaccaagacactgggcctc
accactgagtggatgaagaagaaggcaggaaaatactacaggaaactctacactgagccc
ctgattaaccaacatgaaggtttcaaaaacctcattacgtttgcaaagaagcagttcaac
caaacccagtcaaaagctgttcacacaatccagaacttgtacggctgtgagtggaatgat
gagactgaactccaagattatttccatcactatggatacgatggtgaggatttcatttca
ttggacatgaagaccgtaagatggataacctccgtacagcaggcagataccatcaaacag
aagtgggacgacaacagcaagaatctgcactatctcaaatggtacttcactaaggagtgt
attgacactttgaagaagtatttgaacttcgccagcagcgtcttgaagcggatagtccct
ccatcagtgtctctgctccagaagaccccctcctctccagtgacctgccacgctacaggt
ttctaccccagtggagtcacggtgtcctggcagaaagatggacaagaacagcatgaagat
gtgttgcatggagagattctccccaacgatgatggaaccttccagaaaagtgctcacctc
acaatggactgtgatgaatggaagaacaacaactacacctgtgtggttgaacacaaagag
aacatcatcgccatcagactggatcagtctgtgataaaaacaaacagtgacaagcctcct
gaatctggccccatcattattggagtagtggtagctgtcatcctcctagccctcatcacc
atagctgggtttattatgtggaacaggaagaggacagtctctgatgatggttccaacccc
tccatgacacagcagaaccagatacaacttgaggtttctctctcactaatcaaacaggta
atgagagaagcagagaaaagaggacctttattgaaggacaatgagaccagctga
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integrated database retrieval system
