Salvelinus namaycush (lake trout): 120026890
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Entry
120026890 CDS
T07522
Name
(RefSeq) major histocompatibility complex class I-related gene protein-like
KO
K06751
MHC class I antigen
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
snh04145
Phagosome
snh04218
Cellular senescence
snh04514
Cell adhesion molecules
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120026890
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120026890
04145 Phagosome
120026890
09143 Cell growth and death
04218 Cellular senescence
120026890
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120026890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120026890
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120026890
Exosome [BR:
snh04147
]
Exosomal proteins
Proteins found in most exosomes
120026890
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Antigens
120026890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
ig
Ig_3
Ig_2
C2-set_2
C2-set_3
MFE-2_hydrat-2_N
VSP
Motif
Other DBs
NCBI-GeneID:
120026890
NCBI-ProteinID:
XP_038827550
UniProt:
A0A8U0PM19
LinkDB
All DBs
Position
Sna32:8677724..8691238
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AA seq
335 aa
AA seq
DB search
MKGFVLLVLGIGLLHTASAVTHSLKYFYTASSEVSNFPEFVVVGMVDGVQMVHYDSNSQR
AVPKQDWMNRHTDTLYWERNTGIFLGSQRTFKADVDILKQRFNQSGGVHIVQKMYGCEWN
EDTGVTEGFMQYGYDGEDCVAFDLKTKTWIAPKPQAVITKHKWDNDMSYNEQQKHYLTQT
CIDWLKKYLDYGKSTLKRTVPPSVSLLQKTPSSPVTCHATGFYPSGVKVVWIKDGQEHHE
DVENGETLPNDDGTFQKSTHLRVTPEEWKNNKYQCVVQVTGIKVDFIKVLTESEIQTNRG
ANDPNAIGSGPVIGVAVALLVVVVAVVGVVIWKKK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagggttttgtcttgctggtgctgggaataggacttcttcatacagcatctgctgtg
actcactccctgaagtatttctacactgcatcttctgaagtttccaacttcccagagttt
gtggttgtggggatggtggatggtgttcagatggttcactatgacagcaacagccagaga
gcggtgcccaaacaggactggatgaacaggcatacagacacactgtactgggagaggaac
acagggattttcttgggctcccagcggactttcaaagctgacgtcgatattctaaagcag
cgttttaaccaaagtggaggtgtgcatattgttcagaagatgtacggctgtgagtggaac
gaggacactggagtcacagaggggtttatgcagtatggatatgatggagaggattgtgtg
gcatttgacctgaagaccaagacatggatcgctccaaaaccacaggcagtcatcaccaaa
cacaagtgggacaatgacatgtcttacaatgagcagcagaaacactacctcacccagacc
tgcattgattggctgaagaagtatctggactatgggaagagcactctgaagaggacagtc
cctccctcagtgtctctgctccagaagactccctcctctccagtgacctgccacgctaca
ggtttctaccccagtggagtcaaggtagtctggataaaagatggacaagaacaccatgaa
gatgtggagaatggagagactcttcccaacgatgatggaaccttccagaaaagcacccac
ctcagagtgacgcctgaggagtggaagaataacaagtatcagtgtgtggttcaggtcact
ggtattaaggtggacttcatcaaggttctgactgagtctgagatccagactaacaggggt
gcaaatgacccaaacgccattggctccggccccgtcattggagttgctgtagctctcctg
gtcgttgttgttgctgttgttggggtcgtcatttggaagaagaagtag
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integrated database retrieval system
