Salvelinus namaycush (lake trout): 120026895
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Entry
120026895 CDS
T07522
Name
(RefSeq) H-2 class I histocompatibility antigen, Q9 alpha chain-like
KO
K06751
MHC class I antigen
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
snh04145
Phagosome
snh04218
Cellular senescence
snh04514
Cell adhesion molecules
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120026895
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120026895
04145 Phagosome
120026895
09143 Cell growth and death
04218 Cellular senescence
120026895
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120026895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120026895
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
120026895
Exosome [BR:
snh04147
]
Exosomal proteins
Proteins found in most exosomes
120026895
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
snh00537
]
Antigens
120026895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Psg1
Ig_2
PepSY_TM
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
120026895
NCBI-ProteinID:
XP_038827556
UniProt:
A0A8U0PN84
LinkDB
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Position
Sna32:8866572..8897592
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AA seq
365 aa
AA seq
DB search
MKDFILLVLGIGLLHTASAVTHSLKYFYTASSEVSNFPEFVVVGMVDGVQMVHYDSNSQR
MVPKQDWMNKRTDTQYWERETGNVLGSQQSFKVGINTLKQRFNQSGGTGVHIVQKMYGCE
WDDESGVTEGFNQYGYDGEDFVAFDLKTKTWIAPTPQAVITKHKWDRNIGYNENMNNYLT
QTCIDWLKKYLDYGKSTLMRTVPPSVSLLQKTPSSPVTCHATGFYPSGVMVVWQKDGQDH
HEDVENGEILPNDDGTFQKSTHLTVTPEEWKNNKYQCVVQVTGIKKDFIKVLTESEIQTN
WGKTNRGANDPNTVGPAIGVAVALLVVVVAVVGVVIWKKKSKKGFVPASTSDTDSENSGK
GAQKT
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattttatcttgttggtgctgggaataggacttcttcatacagcatctgctgtg
actcactccctgaagtatttctacaccgcatcttctgaagtttccaacttcccagaattt
gtggttgtggggatggtggatggtgttcaaatggttcactatgacagcaacagccagaga
atggtgcccaaacaggactggatgaacaagcggacagacacacagtactgggagagggag
acagggaatgtattgggttcccagcagagtttcaaagtcggcatcaatactctaaagcag
cggtttaaccaaagtggagggactggtgtgcacattgtccagaagatgtacggctgtgag
tgggatgatgagtctggagtcacagaggggtttaatcagtatggatatgatggagaggat
ttcgtggcatttgacctgaagaccaagacatggatcgctccaacaccacaggcagtcatc
accaaacacaagtgggacagaaacataggttacaatgagaacatgaacaactacctcacc
cagacctgcattgattggctgaagaagtatctggactatgggaagagcactctgatgagg
acagtccctccatcagtgtctctgctccagaagaccccctcctctccagtgacctgccac
gctacaggtttctaccccagtggagtcatggtggtctggcagaaagacggacaagatcac
catgaagatgtggagaatggagagattctccccaacgatgatggaaccttccagaaaagc
acccacctcacagtgacgcctgaggagtggaagaacaacaagtatcagtgtgtggttcag
gtcactggtatcaagaaggacttcatcaaggttctgactgagtctgagatccagaccaac
tggggaaagaccaacaggggtgcaaatgacccaaacaccgttggccccgccattggagtg
gctgtagctctcctggttgttgttgttgctgttgttggggtcgtcatttggaagaagaag
agcaagaaaggctttgttccagccagcacttctgacactgactctgagaactctgggaaa
ggtgcccagaagacttga
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