Salvelinus namaycush (lake trout): 120026916
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Entry
120026916 CDS
T07522
Name
(RefSeq) poliovirus receptor-like isoform X1
KO
K06531
poliovirus receptor-related protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03266
Virion - Herpesvirus
snh04514
Cell adhesion molecules
snh04520
Adherens junction
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
120026916
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120026916
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120026916
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120026916
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120026916
04090 CD molecules [BR:
snh04090
]
120026916
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120026916
CD molecules [BR:
snh04090
]
Proteins
120026916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
V-set
ig
Ig_2
I-set
TM_ErbB1
DUF4342
K-cyclin_vir_C
DUF6338
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
120026916
NCBI-ProteinID:
XP_038827588
UniProt:
A0A8U0PN42
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All DBs
Position
Sna32:complement(8437546..8514283)
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AA seq
519 aa
AA seq
DB search
MARDYAKHCPVSPTKNSLLVIAAILLIIQAASCQRVRVETEVEAYPTESVDLRCQFVDGG
NTKLTQVSWIWEPTEGQRDNIAVFHPTYGESFPESPFSGRVRFIKGTLTSPSITITSLKM
ADAGRYTCEYATYPSGNEQGTTNLVMLAKPKNSASPVVVQASTSGEPVVVAQCEAADSKP
AATIKWMGAVGGSENTTSKKGPDGTVTVRSEYLVVPTPEDNGKEVTCIISQRTQDKPQTF
PMKLAVEYPPTVSILGYDNNWYIGRTDAVLTCQATGNPAPTTVTWTVMSGPMPDTVQINA
NKLIVRKVDEAVNTTFVCEVKNRLGVSKHQVTTAVIEAIVDPSNAGVVAGAIIGSLLALL
LVSALIAVLVTRSRRQRRGYPGNGEPGAYGNKARLFGGAGNKNGGTGPNINGPIYTYRES
DPGALAKVNDFHGPPGSNPTAHDILLSSEMDEAERRKFDALDDSLEEEEERYDSFSVGMA
PAYHIHRRDDEMGGVNIYLDDDMESQRDGSVISRTAIYV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcgagagactacgctaaacattgccccgtatcaccaacgaaaaacagtttgctggtg
atagcagcgatccttctgattattcaagctgcttcgtgtcagcgggtgagggtggagacg
gaggtggaggcgtaccctaccgagtcggtcgacctccgctgtcagtttgtcgacggagga
aacaccaagctcacacaggtgtcgtggatatgggagcccacggaaggccagagggacaac
attgccgtctttcaccccacatacggcgagagcttccccgaatctcccttctctgggcgt
gtccgcttcatcaaaggcaccttgacaagcccctccattactattaccagcctgaagatg
gccgacgccgggcggtacacctgcgagtacgccacctaccccagcggcaatgagcaaggc
accaccaatctggtcatgcttgctaaacccaagaattcggcatctcccgttgttgtccaa
gccagcaccagcggcgaaccagtggtcgtggcccagtgcgaggctgccgacagcaagcca
gcggccaccatcaagtggatgggagcagtcggtggctctgaaaacaccacctccaaaaaa
gggccggacggcacggtgacggtgaggagcgagtacctcgtagtgcccacgccagaggac
aacggcaaggaggtcacctgcataatcagccagcgcacccaggacaagccccagaccttc
cccatgaagttggccgtcgagtatcccccgactgtgtccatattgggctatgataacaac
tggtacatcggccgaaccgacgctgtcctgacctgccaggccactggcaaccctgccccc
accaccgtcacttggacagtcatgtcaggtcctatgcctgacacggtgcagatcaacgcc
aacaagctgatcgtgcggaaggtggacgaggctgtgaacaccaccttcgtctgcgaggtg
aagaaccggctgggagtgagcaagcaccaggtcaccacagcggtcatcgaggccatagtg
gacccgtccaacgcgggcgtggtggcgggggctatcatcggcagcctgctggccctgctg
ctggtcagcgcgctgattgccgtcctggtgacccgcagtcgtcgacaacggcgcggctac
cccggcaacggagagccaggcgcctacgggaacaaggcccgcctcttcggcggagctggc
aacaagaatggaggcactgggcccaacatcaacggacccatctatacgtaccgcgagagt
gaccccggagcgctggccaaggttaacgacttccacggcccgccaggctccaaccccacc
gcccacgacatcctgctgagcagcgaaatggatgaggcggagcgccggaagttcgacgca
ctcgacgacagcctggaggaggaagaggagcgctacgacagcttcagcgtgggcatggcg
ccagcctatcacatccaccggcgcgacgatgagatgggaggggtcaacatttacctggat
gacgacatggagtcacagcgggacgggtcggtcatctcccggactgccatctacgtctag
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