Salvelinus namaycush (lake trout): 120027287
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Entry
120027287 CDS
T07522
Name
(RefSeq) polyhomeotic-like protein 1
KO
K11456
polyhomeotic-like protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120027287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120027287
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
120027287
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120027287
NCBI-ProteinID:
XP_038828133
UniProt:
A0A8U0PN34
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Position
Sna32:complement(7361238..7374367)
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AA seq
903 aa
AA seq
DB search
METDGDQNQGSTNGTTPSGVNSRPSPMNSMSLYERQAVQALQALQRQPNAAQYFQQLMLQ
QQINSAQLQNLAAVQQATFAASRQSSSATNSTSQTTSTTVTSVNVTTSGGGAITSTRAIG
PGSSGTSTISQSVLLGGSAAGQGQMYLRVNRSLRAPLSSQLIFMPGSTATAAMATVTQQP
QTQQQQQQEVTPTSSSNQSDNDQVQNLALRCVGSPKGVGVKTETPERGETATYSLIQSSH
QQFNQSTQQSPTKPTQLQQSHIKIPTYIQSSNANLSSLNLKTGNHHSNTPSSPSTSVPLS
QLLLSGPNFGRGGAITTVNSAATATHILVPTSSAPTQSHSYQMGAATIKPNVSTQTLVVQ
PLQKSTINDKGGHGNGPIPIQPKTQQGVRMPLQLPSRNPPPILPAPPANNQTSAAQPPPH
IPVQIVGARPSSIGNPQALALVQARNACSQDGATLLNSSSSASLLTMVASIASRERGGIG
KGVGLKSLQSAQEALSLAHVSHVQAQANQSPGLNQNQNCTLATSISSQSQAAISPPTLSR
SSLTLPLPLVEASSASTVVGANGEPVCPPPPQGKSMKRKSESDAANEEDGPPPPHLVPMS
EHSPALSSSAMEADPGPLSPSPSPSPSPALSVSRMGGGQGERAPPPQAVVKPHVLTHLIE
GFVIQEGAEPFPVSGPVKEPAGEDLAMDNPDASQPETVNTATVLKCEYCKSFAPARQFRG
TKRFCSLTCSKRYNVSCSQHFRLRQGLHLTHSDEDGVLRRRVPHRTSSEIASAKIAGRPL
PVKCRSESSRSDDVSSCEEEEDDPMSFSPASSSSCHQPPPTLRFEGSAAPHFLPGSPAQW
SVEEVSQFISSLQDCEELAAHFLSQEIDGQALLLLREEHLMSTMNIKLGPALKICAHINN
LKD
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggagacagatggggaccaaaaccagggctctaccaatggaaccactccatcaggagtg
aactcccgcccctctccaatgaactccatgtccctgtacgagagacaggctgtgcaggcc
cttcaggcgctgcagaggcagcccaacgcagcgcagtacttccagcagctgatgctgcag
caacagatcaacagtgcccagctacaaaacctggctgcagtacaacaggccacctttgct
gccagtcgccagtccagctctgccaccaacagcacctctcagaccaccagcacaacagtc
acatctgtgaacgtaaccacttctgggggaggggccataaccagcacccgcgctataggc
ccaggctcttccgggacatccaccataagccaatcagtgctgctgggtgggagtgcagca
ggacagggacagatgtatctgagagtgaaccggtctctgagggctcccctctcctcacaa
ctcatctttatgcctggtagcacagcaaccgctgcaatggcaacggtcacccagcagcca
cagactcagcagcagcaacaacaggaagttacacctacttcctccagcaaccaatcagac
aatgaccaggtgcagaacctggctttgcgatgtgtcggcagtcccaagggggtcggggtc
aagactgaaaccccagagaggggtgaaacagcaacctactcccttatacagtcatctcac
cagcagttcaaccagtccactcagcagtctcccactaaaccaacccaactgcaacagtcc
cacatcaagattcccacctacatccagagctccaatgccaacctctcctcactcaacctc
aagacgggcaaccaccactctaacaccccctcctcaccctccacctctgtcccactctca
cagctcctcctttccggacccaactttggccggggcggggctatcaccacggtaaactcc
gccgccacggcgacgcacattctggtgcccacttccagtgcacccacccagtcccacagt
taccagatgggtgctgccaccatcaagcccaatgttagtactcaaacgctggtggttcag
cctctgcagaaaagcactattaacgacaagggaggccatgggaacggtcccattccaatc
cagcccaaaactcaacagggtgtccgtatgccactgcaactgccctctcgcaacccacct
cccatcctccccgcgccccccgccaacaaccagactagtgccgcccagcctccgccgcac
atcccagtccagatagtaggggccaggccaagctccataggaaacccccaggctttggcc
ttggtccaggcccggaacgcctgttcccaggacggagctacccttctaaatagctccagc
agcgccagcctcctcaccatggtggcctccatcgcatccagagagagagggggtataggc
aaaggggtgggtctaaagagccttcaatcagcccaggaagccctctcattggcccacgtt
tctcacgtgcaagcacaagccaatcagagtcctgggttgaatcaaaatcaaaattgcacc
ttagccaccagcatctcctctcagtcccaggccgccatctctcctcccaccctctcccgt
tcctccctcactctacccctgccgttggttgaagcgagcagtgcatccactgtagtgggt
gccaatggagagcctgtgtgtcctccgcctccccagggtaagtcgatgaagaggaaatcc
gagtcagacgcagccaatgaggaagatggtccccctcctccccaccttgttcctatgagt
gaacactcccctgctctctcctcctctgccatggaagcagaccctggtccactttctccc
tccccctctccctctccttcccctgccctctcggtgtcccgtatggggggtggccagggg
gagagagccccccctccacaggctgtggtcaaaccccacgtcctcacccacctcatagag
ggcttcgtcatccaggagggagctgaacctttccctgtgagtgggccagtgaaagagcca
gctggagaagatttggccatggacaatccagacgccagtcagcctgagactgtgaataca
gctacagtgctgaagtgtgagtactgcaaaagcttcgccccagcgagacagtttagaggg
accaagcgcttctgctccttgacctgttccaagaggtataacgtgagctgcagccagcac
ttccgcctgcgacaggggcttcacctcacccactctgacgaggacggagtcctgaggagg
agggtaccccacaggaccagctccgagatcgccagtgccaaaatagccgggagaccctta
ccagtcaagtgccgctccgagtccagccgttcggatgacgtctccagttgcgaggaggaa
gaggacgaccccatgtccttctccccggcctcctcctcttcctgccaccagcctcccccc
acactccgattcgagggctcggcggcgccacacttcctgcccggcagccctgcccagtgg
agtgtggaggaagtgtctcagttcatatcatctctgcaagactgtgaggagctggcagcc
catttcctgtcccaggagattgatggacaggctctgctgctgctcagagaggagcatctc
atgtccaccatgaacatcaagctcggtcccgccctcaagatctgtgcccacatcaacaac
ctgaaagactga
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