Salvelinus namaycush (lake trout): 120028549
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Entry
120028549 CDS
T07522
Name
(RefSeq) fukutin-related protein-like
KO
K19873
fukutin-related protein [EC:2.7.8.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00515
Mannose type O-glycan biosynthesis
snh01100
Metabolic pathways
Module
snh_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
120028549
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120028549
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120028549
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120028549
Membrane trafficking [BR:
snh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
120028549
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FKRP_N
LicD
Motif
Other DBs
NCBI-GeneID:
120028549
NCBI-ProteinID:
XP_038829667
UniProt:
A0A8U0PRC3
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Position
Sna34:complement(6238173..6241620)
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AA seq
535 aa
AA seq
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MRVSFCQGLLTGAIALNLLILYYVSQAQQQMMEKRRDPGRGSRKAALPASGLEGGMGGLV
GVGAGMVGAGGVGGEGNSHGPRVTVLLREFENFENYVGDVARSFQHQRPELPFLAVSDTP
PYPPLSLPEGARLLVLSPSPEQPPQAHRPEFHVQTEFVLLVPDGVELEQGRAVERLIREL
EGEGGGPVRLVASPVLARSAVQCLHLRVSLREWTATYSTAASGSSGSVCSALQGDVVVLI
RSEDLFNLSVPLGRPLLPSLFIQTSLHGWKVKLLESPGISPSHRPLFSSAHNQWKADSHL
KEATSRLMRNFGLKRLLLADGKEQWHGCGKETERCFGTVRDDTPEYLYLERWTPPCCLRA
LRETTKYVINILESSGVRYWLEGGSLLGAARHQDIIPWDYDVDLGIYLEDVPNCDYLKNL
DSGSLVDANGYVWERAVEGDFYRVQYSEANHLHVDLWPFYPRNGVMTKDTWMEHKQDVEF
PEHFLQPLVQMPFAGVTAYGPNNHRAFLELKFGEGVIENPQYPNPAKKRLDRSRL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgagtttctgccagggccttctgactggagccatcgctctgaacctgctcatc
ctctactacgtctcccaagcccagcagcagatgatggagaaacgccgggacccaggaagg
ggctccaggaaggctgccttacctgcttccggactggagggcggcatggggggcctggta
ggggttggcgcggggatggttggcgctggaggtgtcgggggagaggggaacagccacggc
cctcgtgtgactgtcctcctacgggagtttgagaattttgagaactacgtcggtgatgtg
gcacgctccttccagcaccagagacctgagctgcccttcctggctgtgtctgacaccccg
ccctacccccctctgtctctccccgagggggcccgtctcctggtgctctcccccagcccc
gagcagcccccgcaggcccaccgaccagagttccacgtccagacagagtttgtgctgctg
gtgcctgacggggtggagctggagcagggccgggctgtggagaggctgatccgggagctg
gagggggagggtggggggcccgtgaggctggtggcttccccagtgttggcacgctcggcc
gttcagtgcctgcacctgcgggtcagtctgagagagtggacggccacctattccacagcg
gcgtctgggagcagtggtagcgtgtgttcagcccttcagggggacgtggtggtcctcatc
cgctctgaggacctcttcaacctgtctgtcccactggggaggccactgctgccctcactc
ttcatccagacctccctgcatggctggaaggtcaagcttctggagagccccggcatctcc
cccagccaccggcctctcttcagctcagcccacaaccagtggaaggcagacagccatctg
aaggaggccactagccggctgatgaggaactttgggctgaagcgtctcctactggctgat
gggaaggagcagtggcacggttgtgggaaggagacggagcgttgcttcggtacggtccgg
gatgacacccctgagtacctgtacctggagcgctggacacctccctgctgcctgcgcgca
ctacgcgagaccaccaagtatgtgatcaacattctggagagctccggggtgcgctactgg
ctggaaggaggctccctgctgggggcggcccgccaccaggacatcatcccctgggactat
gacgtggacctgggcatctacctggaggacgtgcctaactgtgactacctgaagaacctg
gactctggttctctggtggacgctaacggctatgtgtgggagcgggcagtggagggggac
ttctatagggtgcaatacagtgaggctaaccacctccacgtggacctgtggcccttctac
ccgcgaaacggcgtcatgaccaaagacacgtggatggagcacaaacaggatgtggagttc
cccgagcacttcctgcagccgctggtgcaaatgccattcgccggcgtcaccgcctacggc
ccgaacaaccaccgcgccttcctggagctcaagtttggggagggggtcatcgagaacccc
caataccccaaccctgccaagaagaggctggataggagccggctgtga
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