Salvelinus namaycush (lake trout): 120030756
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Entry
120030756 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37-like
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120030756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120030756
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120030756
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
120030756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HlyD_2
zf-C3HC4_2
MRFAP1
PIN_8
Motif
Other DBs
NCBI-GeneID:
120030756
NCBI-ProteinID:
XP_038832107
UniProt:
A0A8U0PW05
LinkDB
All DBs
Position
Sna3:34866342..34897390
Genome browser
AA seq
978 aa
AA seq
DB search
MRRYWIEISPNFLHLKKTELAEMDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFS
CIRRWLTEQRAQCPHCRAPLQLRELVNCRWVEEVTQQLDTLQLCNLSKHEENDKDKCENH
HEKLSVFCWTCKKCICHQCALWGGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELI
SLVQEVERNVEAVRGAKDERVREIRNAVEMMIARLDNQLKNKLLTLMGQKTSLTQETELL
ESLLQEVEHQLRSCSKSELISKSPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDS
STFVLANFSTLRQRADPVYSPPLQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPET
SKYEYRVEMVHQASSDPTKNIIREFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLV
LRYQVRSPTFFQKCRDQYWYISQLESAQSSYIQQINNLKERLAIELICRQQSRSSSPPNR
RLGPSTSERDSRSGKGPVAEDSCQTTETKEEEEEEEKTQHDDSNELSDGDLEVDCLTGDE
EVNPLDGSSTSGSSTATSNTEENDIDEETMSGENDVEFSRNLEMEEGELPADVAGAAGSS
NPGARCLRRSGGLSSAGSNNSLLEIDPVILIQLLDLKERSSVESLWGLQPRPPASLLHSQ
VQVHSRKERGERRPQTVRRGAPDSGVLIRLKAQMAEVRSKMSDVKCQLEARGETKAGPSG
RATGVEQGPSYHSELGPSRKPIELDLMGKGPGVSRHCRSGGKKASSPKQDGSRLGLRRAA
DVVEKELRGQSGGESSSDQSLFPRGTSNGSEGALKPRSAHSSPPYLGSSSSCSENKPCSS
KHDQEQLYGSDLYALEFLSGISTATMTRSRTKPIGAALLTDSSLDCDSEPAEIRQSLLSL
AEEPSSCPNEGHVVQKRTVVLLPGMSSDSEIDCDTENEDEVVVLEAGDCRYDTPALPCAG
DQLISDDLSFTTGETTER
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggtattggattgagatttcacccaatttcctccacttgaagaaaactgaacta
gctgagatggatgaacaaagtgttgagagtattgcggaggtgtttcgttgtttcatctgt
atggagaagctgcgggacgctcggctctgcccccactgctccaaactctgctgtttcagc
tgcatacggcgctggttgactgagcagagagcccaatgcccacactgtcgggcaccactg
cagctgcgagagctggtgaactgccgttgggttgaggaagttactcagcagctggacacc
ctgcagctctgcaacctctccaaacacgaggagaacgacaaggacaagtgtgagaaccac
catgagaagctcagtgtgttctgctggacctgtaagaagtgcatctgccaccagtgtgct
ctgtggggaggcatgcatggcggccacaccttcaagcctctggctgagatctatgagcag
cacgtgaccaaggtgaacgaggaggtggccaagctccgccgacgcctcatggaacttatc
agcctggtgcaggaagtggagaggaatgtggaagcagtgcgaggggccaaggacgagcga
gtgcgagagatccgtaatgcagtggagatgatgatcgcccgtctggacaaccagctcaag
aacaaactcctcaccctcatgggtcagaagacctccctcacccaggagactgagctactg
gagtctctcctacaagaggtggaacatcagctgcgctcctgcagtaagagcgagttgatc
tccaagagcccagagatcctgctcatgttccagcaggttcaccgcaagcccatgcagtcg
tttgttaccaccccagtccccccagacttcaccagtgagctggttcctgcctatgactca
agcactttcgttctggcaaacttcagcaccctgagacagagggcagatcctgtctacagc
ccaccactccagatatctggcctctgctggagactcaaggtttacccagatggcaacggt
gtggtgcgtggcaattacctgtccgttttcttggaactgtctgcaggactccctgaaacg
tcgaagtacgagtaccgcgtggagatggtccaccaggcctccagcgaccccactaagaac
atcatcagggagtttgcatcagactttgaggtgggggagtgctggggatacaaccgcttc
ttcagactggacctgctggccagtgagggctacctcaacatgcagactgacactctagtc
ctcaggtaccaggtacgttcgcccaccttcttccagaagtgcagagaccaatactggtac
atcagccagctggagtcagcccagtccagctacatccagcagatcaacaatctcaaagag
aggctggccattgagctgatctgtaggcagcagtctcgcagctcgtcccctcctaaccgc
cgcctgggcccctcgacctcggagagagactcacgctcagggaaaggccccgtagctgag
gacagctgccagaccactgagaccaaagaggaagaggaggaggaagagaagactcagcac
gatgactccaatgagctgtctgacggggatttggaggtggactgtctgacgggggatgag
gaggtgaaccctctggacggcagcagcacctctggcagctccacggcaaccagcaacacc
gaggagaacgacatcgacgaggagaccatgtctggggagaatgacgtggagttcagtagg
aacctggagatggaggagggagaactgcctgccgatgtggcaggagcagcaggaagctct
aaccccggggccaggtgtctgaggcgtagtggtggtctctcctccgctggcagcaacaac
agtttgctagaaatcgaccccgtcatcctcatccagctactggatctgaaggagcgcagc
agtgtggagtcactgtggggccttcaacccagaccccctgcctccctgctacacagccaa
gtccaagtccactccaggaaggagcggggtgagcgcaggcctcagacagtgcggcgggga
gccccagactctggggtcctgattcggctcaaggcacagatggccgaggtgcgcagtaag
atgtcggatgtcaagtgtcagctggaggcacggggggagaccaaggcagggccctccggc
agggccacaggggtggagcaggggccctcttaccactcagagctagggcccagcaggaag
cccatagagctagatctgatggggaaaggacccggggtctccagacactgtcgctctgga
gggaagaaggcctcatctcccaagcaggatgggagcaggctgggcctaaggagggctgca
gacgtagttgagaaggagctgagaggccagagcggtggagagtcgtccagcgaccaaagc
ctctttcccaggggcacctccaacggatcagagggagccctgaagccacgcagcgcccac
agctcccctccctacctgggcagctcgtcgtcctgctccgaaaacaaaccctgcagctcc
aaacacgaccaggagcagctctatgggtccgacctgtacgctctggagttcctcagcggc
atctccaccgccaccatgacacgatccaggaccaaacccataggggccgccctgctgacg
gacagctctctggactgtgactcggagccggctgagatccgccagtcactgctctccctg
gcagaggaaccctcttcatgccccaacgaaggtcatgttgtccagaagcggacggtggta
ctgctgccaggtatgagtagtgatagtgagatcgactgtgacacagagaacgaggacgag
gtggtggtcctggaggctggagattgtcgctacgacaccccggcactgccctgcgcaggg
gaccagttgatctctgatgacctaagcttcaccacaggagagaccacagagaggtga
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