Salvelinus namaycush (lake trout): 120031172
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Entry
120031172 CDS
T07522
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120031172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120031172
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
120031172
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GFIT
Motif
Pfam:
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
120031172
NCBI-ProteinID:
XP_038832705
UniProt:
A0A8U0PXD8
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Position
Sna37:24470829..24479552
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AA seq
825 aa
AA seq
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MRKTFTDKSWILYLKESMDAGDDQNTGSTNGNAPSAGNSRPPQIAHMSLYERQAVQALQA
LQRQPNAAQYFQQLMLQQQINSAQQLHNLAAVQQATLAASRQSNSPNHSVSQATTTVNLS
TTSGGGTMSNPRPLGPATSVTSSALSQSVLLGGNSAGQGQMYLRVNRSLRAPLAASQLIF
MPGGTATAAVATVAQQQPQQQQQQQEVHPTSNAQSDNDQVQNLALHCISTPRVAAVKTEF
PDRRDAANYSPSQQQHPQQQQQQFSQNTQQQIQPQQQQQQMANKLTSYTHPTTLPSINVK
TGNQLNMAPTAATSVPASSPTLPLSQLLLSPSGLCQARAVTTVTPAATVTHILVPTSNVP
TSSQGYPIGSVAPKTNVNTQTLVVQPLQQSNTNMDKVSHSSGPVHIQPKTSQGHRLPVQL
PPRHPPPILPAPLNTGGHHPPHVPVQLVGARQGSVGNSQALAQARSCCPQDKSIAIASTG
GNTTAKPAIGSLKRKSETDATNEMAVEPSQICCPPMRDSAPLCPAPMLDSAPKAVPAFSS
PPTLSWGVGGQGDRAPLPQAVVKPQVLTHLIEGFVIQEGAEPFPVTGPVKEPLAMSVQQA
DNGGPAVLKCEYCESLAPASQFRGSKRFCSKTCAKRYNVSCSHHFQVSRGRASARPPGPP
VPPDSIVRRRGPRRSSSEIACAKIAGRHLPVKECRSESSRSEDVSSCDGEEEEEEEDSPS
LSPSSSLSCPRPAHCDPHLDDSAQGSLPLDEANFLSGSPAHWGVEEVCRFISSLQGCEDL
AAQFLSQEIDGQALLLLREEHLISTMNIKLGPALKICAFINSLRD
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaacgtttacggataaaagctggattttatatttaaaagagagcatggatgca
ggtgatgaccagaacacgggctctaccaatgggaatgctccgtctgctgggaactcccgc
cctccccagatagcccacatgtctctgtatgagaggcaagctgtgcaggcccttcaggcg
ctgcagagacagccgaacgcagcccagtacttccagcagctcatgctgcagcagcaaatc
aacagtgcccagcagcttcacaacctggctgccgtgcaacaggccacccttgctgctagt
cgccagtccaactctcccaaccacagtgtctcccaagcaaccaccactgtcaatctgagc
accacctctgggggagggaccatgagcaatccccgcccactcggccctgccacatcagtg
acatcatcagctctcagccaatcagtgctgctgggtgggaactcagccggacagggccag
atgtacctgagagtcaaccgctccctcagggcacccctcgcagcctcccagctcatcttc
atgcctggtggcacagcaacggctgctgtagcgacagttgcacagcaacagcctcagcaa
caacagcagcaacaggaagtccatcccacctccaatgcccaatctgacaatgaccaggtg
caaaacctggctctccactgtatctccactcccagagtggccgcagtgaagacggagttt
ccagacaggagagacgcagccaactattctcctagtcaacaacagcatcctcagcagcaa
cagcagcagttctctcagaacacccagcagcagatacaaccccagcagcaacagcaacaa
atggccaacaaactgactagctacactcatcccactactctccccagtataaatgtcaag
actggaaaccagctgaatatggccccaaccgctgccacctcagttcccgcctcctctccc
acgctccctctctcccagctcctcctctccccctcaggcctttgtcaggcccgggcggta
accacggttacccctgctgccacggtgacgcacatcctagtccccacctccaacgttcct
acctcctctcagggctaccccataggttcagtcgcccccaaaactaacgtcaacacccag
accttggtggtgcagccactgcagcagtccaacactaacatggacaaggtgagccacagc
tctggccctgtgcacatacagcccaaaacctcacagggtcaccgcttacctgtccagctg
cccccacgccaccctccccctatcctcccggctccgcttaacacggggggccatcacccg
ccccatgtcccagtccagctggtgggagctaggcagggctcagtaggaaactcccaggct
ttggcacaggcccgaagctgctgcccccaggacaaaagcatcgctatagcctctactgga
gggaacaccacggcaaagcctgcaattggctcattgaagaggaagtcggaaactgatgca
accaatgagatggcagtcgaaccttcccaaatttgctgtccaccaatgagagattctgcc
cctctatgtcccgcccccatgttggactcagctcctaaagcggtgccagccttctcctct
ccccccaccctgtcttggggggtggggggtcagggagacagagcccctctgccccaggcg
gtggtcaaacctcaggtcctcacccacctcatagagggttttgtcatccaggagggagct
gagcctttccctgtgactgggccagtgaaggagcctctagccatgagtgttcaacaggct
gacaatggaggccctgcagtgttgaagtgtgagtactgtgagagcttggctccagctagc
cagttcaggggctccaagaggttctgctccaagacctgtgctaagagatacaatgtgagc
tgcagtcaccacttccaggttagtagggggcgagcttctgcacggccgcctggtcctccc
gttcccccagacagcatcgtcagacgcaggggtcctcgcaggagtagctcggagatcgcc
tgcgctaaaatagccggcagacatttgcctgtcaaggagtgtcgttctgagtccagtcgc
tcggaggatgtgtccagctgtgacggagaggaggaggaggaggaagaagattccccatca
ctctcccctagctcctccctctcctgccctaggcccgcccactgcgatccccatttggac
gactcggctcaaggcagcctcccattggacgaggccaacttcctgtctgggagccccgcc
cattggggtgtggaggaggtctgcaggttcatctcttcactacaaggttgtgaggacctg
gctgcccagttcctgtcccaggagattgatggacaggccctgctgctactcagagaagaa
cacctcatctccaccatgaacatcaaactaggacccgccctcaagatctgtgccttcatc
aacagcctacgagactga
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