KEGG   Salvelinus namaycush (lake trout): 120031280
Entry
120031280         CDS       T07522                                 
Name
(RefSeq) tumor necrosis factor-like
  KO
K03156  tumor necrosis factor superfamily, member 2
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04010  MAPK signaling pathway
snh04060  Cytokine-cytokine receptor interaction
snh04150  mTOR signaling pathway
snh04210  Apoptosis
snh04217  Necroptosis
snh04350  TGF-beta signaling pathway
snh04620  Toll-like receptor signaling pathway
snh04621  NOD-like receptor signaling pathway
snh04622  RIG-I-like receptor signaling pathway
snh04625  C-type lectin receptor signaling pathway
snh04920  Adipocytokine signaling pathway
snh05132  Salmonella infection
snh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    120031280
   04350 TGF-beta signaling pathway
    120031280
   04150 mTOR signaling pathway
    120031280
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    120031280
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    120031280
   04217 Necroptosis
    120031280
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    120031280
   04621 NOD-like receptor signaling pathway
    120031280
   04622 RIG-I-like receptor signaling pathway
    120031280
   04625 C-type lectin receptor signaling pathway
    120031280
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    120031280
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120031280
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120031280
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:snh04052]
    120031280
   00536 Glycosaminoglycan binding proteins [BR:snh00536]
    120031280
Cytokines and neuropeptides [BR:snh04052]
 Cytokines
  Tumor necrosis fators
   120031280
Glycosaminoglycan binding proteins [BR:snh00536]
 Heparan sulfate / Heparin
  Cytokines
   120031280
SSDB
Motif
Pfam: TNF Mobilization_B
Other DBs
NCBI-GeneID: 120031280
NCBI-ProteinID: XP_038832888
UniProt: A0A8U0PX20
LinkDB
Position
37:complement(10416531..10418383)
AA seq 255 aa
MEGYAMTTVDMERGLENSLVDSGPVYKTTVTAVAERKASRGWLWRLCGVLLVAALCAAAA
LLFAWCQHGRLATMQDGMEPQLEILIGAKDTHHTLKQIAGNAKAAIHLEGEYNPNLTADT
VQWRKDDGQAFSQGGFKLQGNQILIPHTGLFFVYSQASFRVKCNGPGERTTPLSHVICRY
SDSIGDKANLLSGVRSVCQQNYGNAESNIGEGWYNAVYLSAVFQLNEGDKLWTETNRLTD
VEPEHGKNFFGVFAL
NT seq 768 nt   +upstreamnt  +downstreamnt
atggaggggtatgcgatgacaactgtcgacatggagaggggccttgaaaatagccttgtg
gacagtggccctgtgtacaagacaacggtgacagctgttgctgagagaaaggcctccaga
ggttggctatggaggctttgtggggtcctcttagtagcagctttatgtgcggcagcagcc
ctgctctttgcctggtgtcagcatggaagactggcaacgatgcaggacggaatggagcct
cagctggagatactcattggcgcaaaagatacccaccatacattgaagcagattgccggc
aatgcaaaagcagccatccatttagagggtgaatacaatcctaatcttaccgctgacaca
gtgcagtggagaaaggatgacggccaggccttttcccagggcgggttcaagctacaaggg
aaccaaatcctcatcccacacactgggctcttcttcgtttacagccaggcttcgtttagg
gtcaagtgcaacggcccgggcgagcgtaccactcctctgagtcacgttatttgtcgctat
tcggactccatcggggataaggctaatctacttagcggggtaaggtcagtttgtcaacaa
aactacggtaatgctgagtccaatatcggcgagggctggtacaatgcagtttaccttagt
gcagtgtttcagctgaatgaaggggacaaactgtggactgagaccaatcgactgaccgat
gtggagccagagcacggcaagaacttttttggtgtgtttgcactatga

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