Salvelinus namaycush (lake trout): 120031357
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Entry
120031357 CDS
T07522
Name
(RefSeq) toll-like receptor 2 type-2
KO
K10159
toll-like receptor 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04620
Toll-like receptor signaling pathway
snh05132
Salmonella infection
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120031357
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120031357
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120031357
09171 Infectious disease: bacterial
05132 Salmonella infection
120031357
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120031357
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120031357
04054 Pattern recognition receptors [BR:
snh04054
]
120031357
04090 CD molecules [BR:
snh04090
]
120031357
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120031357
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Toll-like receptors
120031357
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120031357
Pattern recognition receptors [BR:
snh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120031357
CD molecules [BR:
snh04090
]
Proteins
120031357
Glycosaminoglycan binding proteins [BR:
snh00536
]
Hyaluronan
Cell surface receptors
120031357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_9
LRR_5
LRR_NXF1-5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
120031357
NCBI-ProteinID:
XP_038833002
UniProt:
A0A8U0PZ39
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All DBs
Position
Sna37:complement(12957062..12960180)
Genome browser
AA seq
898 aa
AA seq
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MCMHTMILLGFVWFSPPLLVALASPTPATNDERGPCQIYNSGRSANCLGQRLDHVPWKHL
PSTLESIDLSYNEIHAIRVNYFSRLPHLRVLELQFNNISVIEDRAFHNNPLLEHLNIFNN
SLEEIPANALQDLFNLRELLMSNNLYTQATLSADVFSRLTHLKALSMGGPLVKGLRKGDF
QALRNIQLQDFAIKTSSNISYYEPGSLKVIQTGRMGFDMAIDQKPNFLPLILRDMANKTF
SLIQFRNLFEFMYYMGDEDIFRGLQDIKVDSLIFHRGKFNENLMRMALFNLQVTPLKRLT
LQYIDFARSPNFLDNGLGSSIKDLALSRLNLWHISNPDILRFDWRFTWFNKVRLLSIQNV
NFNSVPCDAWLNMEDMEVLDISNNRLQDNILFNQRCDYRGTMPALRSFNVSTNQLTSLQD
LASLTREFKQLKVLDVSHNMLGSAEKSRNCNWMQNITQVIAHHNRFESGALQCLPTTVQF
LDLSYCDLDQLDMAYFQQTISLKELLLNGNKIKFIPSGWRSYSLQSLALDGNSFGLISMG
SFQDMPQLSRLTAGNNPFHCTCDLHAFIQDTISKGKVNITDWPENYKCYHPEALLNIAVA
NFFPGHVACDIRLVIIICVATTAAVVLVLMLICYIFNVPWYIKATYQILRAKYRAHQEGA
SGKSQIYVYHAFISYSHPDADWVRDQLLPCLENSKPPYRLCIHERDFMPGKWIIDNIIEN
IESSEKVIFVLSHHFVNSDWCNYELYFAQQRAIGKTFSDVILVVKEPIDPESLPSKYCKL
KKMLNTKTYLEWPQQAKQQTFFWAQLRSCLGKPTVTREQALSGRSSSVSSVGAVPVIELP
LEDGNPAIAMPNLDREAELHKVVPQEIENISVRSAEFYGQRPIPVAVASDKISQACSL
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgtgcatgcacacaatgattctactgggttttgtgtggtttagtccgccacttcttgtg
gcccttgcctcaccaacccctgctacgaatgatgagagaggcccctgtcaaatctacaac
tctggacgctccgcaaactgccttggtcagcgactggatcatgttccatggaagcacctc
ccttccacgcttgaaagtatagatctctcctacaatgaaattcatgccattcgtgttaat
tacttttctcgcctacctcatcttcgtgtcctcgagctgcagttcaacaacatctctgtg
attgaggaccgtgccttccacaacaaccccctcctggagcatcttaacatctttaacaac
tccctagaggaaatccctgccaacgccttgcaggacctctttaatctaagggaactcctt
atgtcgaataacctttacacccaggccacattgtcagctgacgttttctccagattgacc
cacctcaaggccctgtccatgggcggccccttggtcaagggtctaaggaaaggggacttc
caggcattgaggaacattcagttacaggactttgccattaaaacttcatcaaatatcagt
tactatgaaccgggtagtctgaaggtaatccagacaggtagaatgggttttgacatggcc
atagatcagaagccgaatttcctacctttgattctacgagacatggccaacaagactttc
agtctcatccaattcaggaacctctttgagttcatgtattacatgggagatgaggatatt
ttcagaggcttgcaagacatcaaagtagattcgctcatctttcaccgtggaaaattcaat
gagaaccttatgaggatggctctgtttaatctacaggtcaccccccttaaacgtctgaca
cttcaatacattgactttgctcgctcgcccaactttctggataatggcttgggatccagt
atcaaagaccttgcactgagtagactaaatctgtggcacatcagtaatccagacattttg
cgattcgactggcgcttcacatggttcaacaaagtccgactgctgtccattcagaatgtc
aacttcaactctgtgccttgtgatgcctggcttaatatggaagacatggaggttttggac
atctcaaacaaccgcctgcaggacaacatcctcttcaaccagagatgcgactacaggggc
accatgccggctcttcgttccttcaatgtcagcaccaaccaactgaccagccttcaggac
ttagcctccctgaccagggagttcaaacagttgaaggtcctggatgtcagccacaacatg
ctgggctctgctgagaagagtcgcaactgtaactggatgcagaacatcacccaggtgatc
gctcaccacaacagattcgaaagtggtgccctccagtgtctgcccaccacagtacaattc
ctggacctctcgtactgtgacctggaccagctggacatggcctacttccaacaaaccatc
agcctcaaggagctcctgctcaatgggaacaagatcaagttcatcccctctgggtggaga
agttactccttgcagtcactggctctggatgggaactcctttgggctcatcagcatgggc
tccttccaggacatgccccagctgtctcgactgacggcggggaacaacccatttcactgc
acctgcgacctccatgccttcatccaggacacaatttccaaggggaaggtcaacatcact
gactggccagagaactacaagtgttaccatccagaggccctgctcaatatcgctgtggca
aatttcttcccgggtcacgtggcctgcgatatcagactggtcatcatcatctgtgtggct
actactgcagctgtggttttagtgttgatgcttatatgctacatattcaatgttccctgg
tacatcaaagccacatatcagatcctcagagccaaatacagggctcatcaggaaggagca
tctggaaaatcacagatctatgtttaccatgcctttatctcctacagccacccagatgca
gactgggtcagggaccagttgttgccctgcttggagaacagcaagcccccctaccgactc
tgtatccatgagagagacttcatgccaggaaagtggatcatcgacaacatcattgaaaat
attgagagcagcgaaaaggtcatatttgtgttgtcacaccactttgtgaacagcgattgg
tgcaactacgagctctactttgcccagcaaagagccatcggcaagaccttcagcgatgtt
attctggtggtgaaagagcccatcgaccctgaatctctgcccagcaagtattgtaagctc
aagaagatgctgaacaccaaaacgtacctagagtggccccagcaagccaagcagcagacc
ttcttctgggctcaacttaggagctgcctgggcaagcccacagtgactagagagcaggct
cttagtggtaggagcagcagtgtatcctcagtgggcgctgtgcctgtgatagagctccct
ctagaggatgggaatccagcgatagctatgccaaatttagacagagaagcagagctccac
aaagtagttcctcaggagatcgaaaatatttcagtgagaagtgcagagttttatgggcaa
agaccaatccctgtagccgtggcatcagacaaaataagccaagcatgtagcttgtaa
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