Salvelinus namaycush (lake trout): 120032023
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Entry
120032023 CDS
T07522
Symbol
bbs10
Name
(RefSeq) Bardet-Biedl syndrome 10 protein isoform X1
KO
K19401
Bardet-Biedl syndrome 10 protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120032023 (bbs10)
Cilium and associated proteins [BR:
snh03037
]
Primary cilia and associated proteins
BBS-CCT complex
120032023 (bbs10)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
120032023
NCBI-ProteinID:
XP_038833861
UniProt:
A0A8U0PXE0
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Position
Sna38:complement(6043093..6047191)
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AA seq
637 aa
AA seq
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MRLQPQCLQLDSVLQTVSVLEAVIRRSFGPDGGQVLFTRDTGQTLLTRHGTRILTALRVE
HPLARMVVECVRRHSSVTGDGSKTFVLLLASLLREIQKHTRKARQEGAGAKRLAGALLDF
GLDELSDVITVGVAPHGSSLSDPHTPGQTDTHTLCRLLSAFLHTRISPTHAEIISRLTCE
LLSHWSCHGDFINEHFPALHTAVSGFPIGCSRLLEGQVIHADFSTPLPLCDHGPIRALAV
TEPLEPSLLIGGTVLEVGGANRGIESVCVRLGRGLDSVCVILQHLGVSLLLSSVRQSEAV
LAAVGRYGVCVLECVCEDDLTLFSVISGALPVSDWAVIGQEHVATVTFCRPLVLGAHRFV
NVGFPKTEDRGRPHSLVVCGLTEGQTEQSVCAVRDALHMLHTTWGPKHRTRATERMARAD
VMEPCCVISVGGTFEFLLHHTLLQRKHGHTHSVTHRHTHTPSHTSTHTLSHTDTHTPSHT
GTHTLSNADTHTLSHLDDPTVSEMLAEALLSVPRQIYSHNPRRYLEAHAHTLSCIRNHGI
FPDPPEMSAVLAADGSNMVQADTGSGSMFGSGVKEMSVWSSSGSSSGVESVSCKYQLILA
VLQCLRSLLSVDTVLHANSSHTLAHTCQREEEEEDDD
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcggttgcagccccagtgtctgcagctggactctgtactgcagacagtgagtgtcctg
gaggcagtgatccggaggagctttggtcctgatggaggacaggtgctgttcacacgggac
acggggcaaactctgctgacacgccacggaacacgcatcctcacagccctgcgggtggaa
cacccgctggccaggatggtggtggagtgtgtgaggagacacagctcggtgacaggagat
ggctccaagaccttcgtcctgctgctcgcctcattgctacgggagatacagaaacacacc
cgaaaagcccgccaggaaggcgcaggtgccaagcgtttggctggagctctgctggacttc
ggattggacgagctcagtgatgtcatcactgttggagtggctccacatggctcctccctt
tcagacccacacaccccaggacaaacagacacacacactctgtgccgcctactcagtgct
ttccttcacacccggatcagccctactcatgctgaaatcatcagccgactgacctgtgag
ctgctctcgcattggagctgccatggcgacttcattaacgaacacttccctgctctgcac
acagcagtatcaggcttccctattggctgttcccgtctgctggagggccaggtcatacat
gcagatttctctacacccctcccactctgcgaccatggaccaatcagggccctagcggtg
acggaacccctggaacccagcctgctgattggtggaactgtgctggaggtgggtggggct
aatagaggaatagaaagtgtgtgtgtgagattagggcgggggttagacagtgtgtgtgtc
attctacagcatctaggagtgtctctgctcctctcatcagtcagacagtcggaggccgtc
ctggctgcagtggggaggtacggggtgtgtgtgttagagtgtgtgtgtgaagacgacctc
accttgttctctgtgatcagtggagccctgcctgtctcagactgggctgtgattggacaa
gaacatgttgctacggttaccttctgccggccgctggtgctgggagctcacaggttcgtc
aatgtggggtttcctaagacagaggacaggggcagaccccacagtctggttgtgtgtgga
ctgacagagggccagactgaacagagtgtatgtgctgtacgagatgctctacacatgctg
catactacctgggggcccaaacacaggactagagctacagagagaatggcacgcgcagac
gtgatggagccttgttgtgtcatttccgtgggcgggacttttgagttcctgttacaccac
accctcctacagcgcaaacacggacacacacactctgtcacacacagacacacacacact
ccgtcacacacaagcacgcacactctgtcacacacagacacacacactccgtcacacaca
ggcacgcacactctgtcaaacgcagacacacacactctgtcacacttggacgaccctact
gtctcggagatgctagcagaggccctactgagtgtgcccagacagatttactcccacaat
cctcggcgctacctggaggctcacgcgcacactctcagttgcatacgtaaccatggtatt
tttccggacccgccggaaatgagtgctgttctggcagcggatggttctaatatggtccag
gctgacactgggtcagggtctatgtttgggtcaggggttaaggagatgtcggtttggtca
agctctggctctagttcaggtgtggagtcagtgtcctgtaagtatcaactgatcctggct
gttctacagtgtctcaggagtctactgtctgtggacactgtactacacgctaatagctca
cacacactcgcacacacctgtcagagagaagaggaggaggaggatgatgactga
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