KEGG   Salvelinus namaycush (lake trout): 120032149
Entry
120032149         CDS       T07522                                 
Symbol
aff4
Name
(RefSeq) AF4/FMR2 family member 4 isoform X1
  KO
K15185  AF4/FMR2 family member 4
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120032149 (aff4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snh03021]
    120032149 (aff4)
Transcription machinery [BR:snh03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     120032149 (aff4)
SSDB
Motif
Pfam: AF-4 AFF4_CHD AF4_int
Other DBs
NCBI-GeneID: 120032149
NCBI-ProteinID: XP_038834045
UniProt: A0A8U0PZN7
LinkDB
Position
Sna3:complement(50202401..50241801)
AA seq 1145 aa
MASLSGNMNREDRNVLRMKERERRNQEIQQGGEAFPAHSPLFPEPYKVSSKEDKLSSRIQ
SMLGNYDEMKEPIGDTIPKLGGKPSGSSSSEEKSGPSLFGDQRGGGSGQNSKWTPVGPAA
STSSSQSSKRSSLQGSHSGSRSSGSSGSSQRHEREHKKSSKHGSEHSKSHTSSPAKGSLS
SSHSRSLGAEHHGKERYRSKSPREREANWDSPSRVHTSFTSGPHSSQAFPPSLMSKPSSM
LQKPTAYVRPMDGQEMVEPKTSSAMYSGQSHSSTMGEMKSNGKASLSKLKMPSQPVEGPM
TGDANCVDEILKEMTQSWPPPLTAIHTPCKTEPSKFPFPCKDTQHASFPGAHKRPTKTSS
SHQSKAAPCDGDQANNVLLEDDLKLSSDEDSDGEQDSAKNASRNASASNNSNNSEGAVHS
RDDSSSHSGSESSSGSDSESESSSTDSEANEPPRPASPEPEPATANKWQLDNWFKKAKQF
SPASPVDSNVSTKYKKEGRDQSSGRGYSGQGGSKDSGAPTPSRDLRAAQKGSESGRGRQK
SPAQSEGGPGQRRTVGKKQPKKSEKPPVVEEPKGGLRVESEPAPEIPPHRPKAATKGSRK
PNIKKEPKSSPRPAVDKRKSKAPTKTSQKSREFVDTDSSSSESEENDSIPSSSQTPKYTE
SIRTPVCVFSPMEEKELLSPLSDPDDRFPIRQQQVLMVKIDLSLLSRIPGRPYKDLLEPK
VERDCSLDRDKDFQKQPSEKSSGKGKRKHKNDDESAKPDSKKSRLEDKSSSHHKNSSKES
KRAMEAKVKEEPVPSPSISGSGGLQRTPKAEHQSRKRTVSQSSTSLSSGASSGKEGGHST
KSSSTSKHRKGEDKQGRSSREGKEKSSKGSDNKLAVPRLSSDGSKSLRSKLLFEDRVHSA
DHYLQQAKKLKHNADALMDRFEKAVYYLDAVVSFIECGNALEKSAQEAKSPFPMYAETVE
LIKYTMKLKSYMAPDATSADKRLAVLCLRCQSLLYLRLFKLRKESALKYSKTLTEHLKNS
LSNTQAPSPGMGNKAAGMPSPVSPKLSPGSTGSYSSGTSSGSSSVTIPQRIHQMAASYVQ
VTSNFLYATEVWDQAEQLAKEQKEFFTELDKVMGPLIFNTSSMTELVRFTRQGLHWLRLD
AKLIP
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggcctctctgtcaggcaacatgaaccgtgaagaccggaatgtgctccgtatgaaagaa
agagaaaggcgaaatcaagaaatccagcagggaggagaggcctttccagctcactcccct
ctctttcctgaaccttataaagtttccagcaaagaagataaactgtccagtcgtatccag
agtatgcttggaaactacgacgagatgaaggaacctatcggagacacaattccaaaactc
ggtggcaaaccctcaggctcgtcgtcctccgaggagaagtctggcccgtctctgtttggg
gaccagcgtggcggtggcagtggccagaacagtaaatggactccagtaggcccagcggcc
agcacctcgtcctcccagtcctctaagagatccagcctccagggcagccacagcggtagc
aggagtagcggtagcagcggcagtagccaaagacacgagcgggaacacaagaagtccagc
aagcatggctcagaacactccaagtcccacacgtctagcccagccaagggttccctgagc
tccagtcactcccggtcactgggtgctgagcaccacggcaaggagcgctaccgttccaag
tccccacgtgagcgagaggccaactgggactccccgtcgcgtgtgcacacatctttcacc
agcggcccgcattccagccaggccttccccccttcgctcatgtccaagcccagctccatg
ctacagaagcctacagcctacgtgcggcccatggatggccaggagatggtggagcccaag
acctcgtcagcgatgtacagtggccagtcccacagcagcaccatgggggagatgaagtcc
aacggcaaggcgtcgctctccaagctcaagatgccctcgcagcctgttgagggtcccatg
actggggatgcgaattgtgttgatgagattttaaaggaaatgactcagtcctggccccct
ccgttgacagccattcacaccccctgcaaaacagagccttcaaagtttccattcccctgc
aaggacactcagcacgcaagttttcctggtgcacacaagagaccaaccaagacgtcgagc
agtcaccagtccaaggcagcgccatgcgatggagatcaggccaataatgttttgctggaa
gatgacctgaagctcagcagtgatgaggacagtgatggagaacaggactcggccaaaaac
gcctccagaaacgcatcagcaagtaacaacagtaataacagcgagggagcggtgcactcg
cgggacgactccagcagtcacagtggctcagagagcagttcggggtcggacagcgagagc
gagagcagctccacggatagcgaggccaatgagccccctcgcccggcatcaccagagcct
gaaccagccacagccaataaatggcagttggacaactggtttaagaaagccaagcagttt
tccccggcctccccagtggacagtaatgtatccaccaagtacaagaaggaggggcgggat
cagagctcaggtcgtggctacagtgggcagggcgggtctaaagactcaggggcacccaca
cctagcagggacctgagggcagcacagaagggctcagagagcggccgtggccggcagaaa
tctcccgctcagagtgagggtggcccgggccagcgcagaacagtgggtaaaaaacagccg
aaaaagtctgagaagccaccggtggtggaggagccaaagggggggctgagggttgagagt
gaacccgctcctgagatccctccccatcggcccaaggccgccaccaagggctcccgcaaa
ccaaacatcaagaaggagcccaagtcctcacccagaccggctgtggacaagcgaaagagc
aaggcgcccaccaagacttcccagaagtcccgggagtttgtggacacggactcttcctcc
tcagaatcggaggagaacgacagcattccctcgtcgtctcagacccccaagtacacagag
agcatcaggactccagtgtgtgtgttctctcctatggaagagaaggaactgctctctcct
ctcagcgatccggatgaccgctttcccatcaggcagcagcaggtgctcatggtgaagatc
gacctgagcttgctctcccgcattcctggacggccctacaaagacctgctagagcccaaa
gtagagagggactgctccctggacagagacaaggacttccagaagcagccctctgagaag
agctccggtaagggcaagaggaaacacaagaatgatgacgagagcgccaagcctgatagc
aagaagtccagacttgaagacaaatcctcatctcatcacaagaacagcagcaaagagtct
aagagggcaatggaggccaaggtgaaggaagagccggtgccctctccctccatatcaggg
tcaggagggctgcagagaacacccaaggcagagcaccagagccgcaagcggacggtcagc
cagtcttccacctccctgtccagcggagccagcagcggcaaggagggaggccacagcacc
aagagcagctccacctccaaacacaggaagggcgaggacaagcagggcaggagcagccgg
gagggcaaggagaaatcctcaaagggctctgataacaagcttgctgtgccacggctctcc
tcggacggctcaaagtccctgagatcaaaactgctgtttgaggacagggttcactctgcg
gatcactacttacaacaggccaagaaacttaaacacaatgcagatgcactgatggaccgg
tttgagaaggctgtgtactacctggatgctgtggtgtcctttattgagtgcggaaacgca
ctggagaagagtgctcaggaggctaagtcccccttccccatgtatgccgagaccgtggag
ctcatcaagtacactatgaagttaaagagctacatggccccagacgctacgtcagcagac
aaacggttagccgtgttgtgcctgcgatgccagtccctcctctacctgcgactgttcaag
ctgaggaaggagagtgcactgaaatactctaaaacactcacggagcacctgaagaattcc
ttgagtaacacccaagcgccctctcctggaatgggaaataaagcggctggcatgccctct
ccagtctctcccaagctgtccccaggtagtaccggtagctactcgtcaggcacatccagc
ggcagctcctcggtcaccattccccaacgcatccaccagatggctgccagctacgtccag
gtcacctccaacttcctctatgccaccgaggtgtgggaccaagcagagcagctggccaaa
gagcagaaagagttcttcacggagctggacaaggtgatgggccctctgatcttcaacacc
agcagcatgactgaactggtgcgcttcacacggcagggcctacactggttgcggctggac
gctaagctcattccctga

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