Salvelinus namaycush (lake trout): 120033190
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Entry
120033190 CDS
T07522
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120033190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120033190
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120033190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120033190
NCBI-ProteinID:
XP_038835399
UniProt:
A0A8U0Q4W6
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All DBs
Position
Sna40:7741388..7779495
Genome browser
AA seq
1476 aa
AA seq
DB search
MRHHEGRYLYEPHTLHAMHGPPGLGGSPVMSDISLIRLSPHAAGTGESPFSPAHPYFNPH
MEHYLRSLHSSPTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPGASPAEYYHLMASH
RNPYGELLMQGGGAAAAHLPEYIPPMDVPRFSSPRLTPRLNRKRALSISPLSDASIDLQT
MIRTSPNSLVAYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLS
VFGHTPPLIQPPPTFCSRQSALGLSSLPPSSHNHNNGSQSKESPENTSGDSAVSSTVNPM
ITKRSKVKTELECPRPLSPCSPDHLGGMLDLKEDLDKDECKHEPEMVYETNCHWEGCSKE
YDRQEQLVHHINNDHIHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTF
EGCCKAYSRLENLKTHLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCK
VPGCTKRYTDPSSLRKHVKTVHGPEAHITKKQRSDLPPSRPMPPKENGENETGRGMEEKM
DSTSRGTEDYLQVTSIKTENSVMYQSSPGGQSSCSSEPSPLGSSTNHDSGIEMALHSSGG
SMGDLTGLDDPSGPLMDSLFSGLSSGTAGVGVGLHLRQHLGPSHIHRLEHLKKEKLKTVR
DSCQWANHHPSPPVQNTKLPPIPANGSLLERGNMGGGPGSFLSLSELCSSKVTVLNQLDH
LMERRDSTTSTVSSAYISRRSSGISPCHYSRRSSDASTFSGHRHNNISSTGSYDPISTDL
SRRSSDASQCGGGGGGGGLPSHLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTC
MALYRDASQGDSSSGYSSFNPIAPSGVPRRCSGDMGGYNGHSMMPHEAPSNIPRRASDPV
PRPPSLDPLSHQPQVQRYNSMGNMQNLHPHASQPNQALSAAERRHQPRSDGSLQRYPYCP
RPPSISENVAMETMAGDMSGSRNNSEEEMMVLPDDVVHYIASQGGAGESDCANGYNRQAQ
CGFHGNTINPNPQQQQQFYHQQRMAVMDTNMNMNPSSAPQTMRLSCALSPGHPPQSFPTL
PSKTSTMPVQWNEVSSGTVEALHNPTQQLPFGRSNPNLAMVQQKQNFVSFQNQNLNSNQH
IAQIIHNLAHAAQQGRYIEQHKDDLRLSCVQQQSLQQQQPANANLNEPVSLGYGFNQGLG
PSDANANQRSSCSSMVVGGTLGMLSQNGKQQQTVHTVDTQNSRLGAQPGGSQSSQVTFKD
SGVNSSRMISQNYNIASQVQHPIQNGGQILLQPRPPTEPKSLSRQHSGSMTMQRQNSIGN
HCSNGNNTDSNVMFYTGQIHVFEPNGNVNMQMMTSSVVDVLQCPSDSTETAMTSPGVSNQ
VSSTVDSSNGTGAEEPQIDFDTMLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPQNSVT
LPSLPLPAGGSNMAIGDMSSLLTALAEENKFLNMMS
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaccatgagggaagatacctctatgaaccacacaccctacatgccatgcatggt
ccacctggactaggtggcagcccggtcatgtcagacatctctctgatccgtctgtccccc
cacgcagccggaacgggggagtcccccttcagccccgctcacccctacttcaaccctcac
atggagcactacctccgctcccttcacagcagcccaaccctgtccatgatctctgcagcc
cgcggactcagccctgcagacttggcgcatgaacacttgaaagagcggggtctgtttggg
ttgccccctccccctcctggagccagccctgctgagtactaccacctgatggccagccat
cgtaacccctacggagaactgctgatgcaggggggtggggcggcagctgcacacctgcca
gaatacatcccccccatggatgtgccacggttctccagtccaagactgacccccaggctg
aacagaaagcgagccctgtccatctctcctctctcggacgccagcatcgacctgcagacc
atgatccgtacctcgcccaactctctggtggcctacatcaacaactcacgctccagctct
gcagccagcagctcctatggacacctctctgttggaggcatcagtccgtcctttaccttc
ccccaccacatcaaccccatggcctaccagcagcttctgtcccagcagagaggcctgagt
gtgttcgggcacacccctcctctcatccagcccccacccaccttctgcagtcgccagtct
gccctgggtctctcctctctgcccccctcctcacacaaccacaacaatggctcacagtca
aaggagtcacctgagaacacaagtggggactcggcagtgagcagtacagtcaatcccatg
atcaccaagaggtcaaaggtgaagacagagttggagtgtccgaggccactgtccccatgt
tctccggatcatctaggtgggatgctggacctgaaggaggacttggataaagatgaatgc
aagcatgagccagagatggtgtatgagaccaactgccactgggaaggatgctccaaggag
tacgacaggcaggaacaactggtccatcacatcaataacgaccacatccacggggagaag
aaggagtttgtgtgccgctgggatgagtgttccagggagcagaagccctttaaggcccag
tacatgctggtggttcacatgaggagacacacgggggagaagccacacaagtgtaccttt
gagggctgctgtaaggcctattctcgcctggagaatctgaagacccacctgcgatctcac
accggggaaaaaccatatgtgtgtgaccacgagggatgcaacaaagccttctccaacgcc
tcggacagagccaagcaccagaaccgcacacactccaacgagaaaccgtacgtgtgtaag
gtccccgggtgtacgaagcgctacacggaccccagctctctcaggaagcacgtgaagaca
gtccacggaccagaggcccacatcaccaagaaacagcgcagcgacctgccgcccagcaga
cccatgccacccaaagagaatggagagaacgagacaggccggggcatggaggagaagatg
gacagcacctcgagaggcacggaggactacctgcaggtcacgtctatcaagacggagaac
tctgtgatgtatcagtccagccctggtggtcagtcgtcatgtagcagcgagccgtcgcca
cttggcagttccaccaaccatgacagtggaatagagatggccctccacagcagtggagga
agcatgggggacctgactgggctggacgacccctcggggcccctcatggactccctcttc
tctggcctctcgtctgggacagcaggggtcggggtgggcctccacctacgtcaacaccta
ggccccagccacatccacagactagaacacctgaagaaggagaaactgaagacggtgagg
gactcctgccagtgggccaatcatcatccatctcctccagtccagaacaccaagctaccg
cccataccagcaaacgggtcccttctggagagaggaaacatgggtggtgggcctggatcg
ttcctcagcctcagtgagctgtgttccagtaaggtgactgtcctgaaccagctggaccat
ctgatggagcgcagggacagcaccaccagcaccgtctcctctgcctacatcagccggcgc
tcctctggcatctccccctgccactacagccgccgctccagcgacgcctccacgttcagt
ggccaccgccacaacaacatcagctccaccggctcctacgaccccatctctacagacctg
tcccggaggtccagcgacgctagccagtgtggaggtggtggaggagggggagggctgccc
agtcacctcagcctcacccccgcccagcactaccacctcaaggctaaatatgcggcggct
acaggtggagccccacccacacctctacccaacatggagaggatgagtctcaagacctgc
atggccctctacagggatgcttcccagggagactcgtcgtctggttactcctccttcaac
cccattgcccccagtggtgttcccaggcgctgcagcggcgatatgggaggctataacggc
cacagcatgatgccccacgaagctccgtccaacattccccgtcgggctagcgaccccgtc
ccccgaccgccgtccctggacccgctgtcccatcagcctcaggtgcagcgctacaacagc
atgggtaacatgcagaacctccacccacacgcctcccagcccaaccaggccctgtctgca
gccgaacggcgccaccagccgcgctccgacggcagtctgcagcgatacccttactgcccc
cggccgcccagcatctctgagaacgtggccatggagaccatggccggcgacatgagcggt
agtcgcaacaacagtgaggaggagatgatggtacttcctgatgacgtcgttcactacatc
gcctctcagggcggagctggagagtcagactgtgccaacgggtacaaccgacaagcacaa
tgtggtttccatggaaacacaataaaccctaacccccagcagcaacagcagttttaccac
cagcaaaggatggctgtgatggacaccaatatgaatatgaacccctcgtctgcaccacaa
accatgcgcctctcctgtgccctaagcccaggccatccgccgcagtctttccccacctta
cccagtaagacgagcaccatgccggtgcagtggaacgaggtcagctcaggtactgtggaa
gctcttcacaacccaacccaacagctgccgttcggtcgaagcaacccaaacctcgccatg
gtccaacagaaacagaactttgtctcgttccagaatcagaatcttaactccaaccaacac
attgcacagattatccacaacctggctcacgcagcccagcaggggagatacatagagcag
cataaggatgacttgaggctgagctgtgtccagcaacagagcctacagcaacagcagccc
gctaatgctaacctcaatgaaccagtgagtctcgggtatgggtttaaccagggtcttggt
cctagcgatgctaacgctaaccagcggtcctcctgtagtagtatggtagttggtggcact
ctgggtatgttgagccaaaacggtaaacaacaacagacagtgcacactgtagacacgcag
aacagccggctgggggcgcagccaggggggagtcaatcgtctcaagtcacatttaaggat
agcggtgtgaattcttcacggatgatctcacagaactataatatagcgtcccaggttcag
catcccatccaaaatggaggtcaaatactcctccagccaagaccgcccacagaacctaag
tctctaagcagacagcattcagggtcaatgacaatgcagcgacaaaactcaattggcaat
cactgcagcaatggcaacaacacagacagcaatgttatgttctacacaggacagatacac
gtgtttgagccaaacggaaacgtcaatatgcagatgatgacatcatcagtagtggacgtt
cttcaatgtccctcagacagcactgagaccgccatgacctcaccgggagtaagcaaccag
gtctccagtacggtggactcgtccaatgggacaggggcagaggagccccagattgacttt
gacaccatgctggatgacggggaccactccagcctgatgtcaggcaccatcagccccagt
atcctccagagtctgtcccagacctcctccagactcaccaccccccagaactctgtcacc
ctgccctccctgcccctccctgcagggggcagcaacatggccatcggcgatatgagctcc
ctgctcaccgcgcttgcagaagagaacaagttcctcaacatgatgtcataa
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integrated database retrieval system