Salvelinus namaycush (lake trout): 120034371
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Entry
120034371 CDS
T07522
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00514
Other types of O-glycan biosynthesis
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120034371
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120034371
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120034371
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120034371
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120034371
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Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
120034371
NCBI-ProteinID:
XP_038836828
UniProt:
A0A8U0Q5I9
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Position
Sna41:7440814..7448914
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AA seq
380 aa
AA seq
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MSKSYGKKTVISITSAGVTCLLLLLVVAQHQRVQVDEVPNQREMGTRSLQSMDTVATDGV
KDVQQQVNSDAQAKKGFSAYFSKLTRGRREADKPAGSAQSATDASPAEDISADDIFIAVK
TTKKFHQSRLDLLLDTWISRNMQQTYIFTDGEDEELKKKIGSHAINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNTRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIES
VLGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRF
KSVHCLLYPDTPWCPLQVAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttatggtaagaaaacggttatctctataaccagtgcaggagtcacctgc
cttctgttgctcttggtggtcgcgcagcatcaaagagttcaggtagacgaggttccaaac
cagagagagatggggacgcgctcactccagagcatggacaccgtggctacggacggagtg
aaggatgttcagcaacaggtcaattcggatgcgcaggcaaaaaaaggattctctgcgtat
ttttccaagttgacccggggacggagagaggcggacaagcctgcagggtccgctcagtca
gcgacagatgcctcccccgcagaggacatcagtgcagatgacatctttatcgctgtcaaa
accacaaagaagttccatcagtctcgactggatctccttctggatacctggatctctaga
aacatgcagcagacatacatcttcacagacggagaagatgaggagctgaagaagaaaatt
gggagtcacgccatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtacgacaagttcattgagtctgggaaaaagtggttttgtcacgtg
gatgatgataactacgttaacacgaggactctggtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccatcgaggccacagagagg
ctaggagacaacaagatgcgaccagtaaacttctggtttgctactgggggagccggcttc
tgtgtgagtcgaggcctggctttgaagatgagcccatgggccagtggcggccattttatg
aacacggcagagaagatccgtctgcctgacgactgcaccatcggctacatcatcgagtca
gtgctgggggtgcctctgacccgcagcaacttcttccactcccatctggagaacctgcaa
caggtgtccagatctgaacttcacaaacagatcacattgagttatggaatgtttgagaac
aagaggaacatcatcaatatgaaaggggctttcccagtggaggaagacccatcaaggttt
aagtctgtgcactgtttgttgtacccagacaccccttggtgcccgcttcaggttgcctac
tag
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