KEGG   Salvelinus namaycush (lake trout): 120034372
Entry
120034372         CDS       T07522                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03420  Nucleotide excision repair
snh04110  Cell cycle
snh04114  Oocyte meiosis
snh04120  Ubiquitin mediated proteolysis
snh04141  Protein processing in endoplasmic reticulum
snh04310  Wnt signaling pathway
snh04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120034372
   04120 Ubiquitin mediated proteolysis
    120034372
  09124 Replication and repair
   03420 Nucleotide excision repair
    120034372
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    120034372
   04350 TGF-beta signaling pathway
    120034372
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    120034372
   04114 Oocyte meiosis
    120034372
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120034372
   03400 DNA repair and recombination proteins [BR:snh03400]
    120034372
Enzymes [BR:snh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     120034372
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   120034372
  Multi subunit type E3
   SCF complex
    Ring finger protein
     120034372
   Cul2 complex
     120034372
   Cul3 complex
     120034372
   Cul4 complex
     120034372
   Cul7 complex
     120034372
   Cul8 complex
     120034372
   Cul9 complex
     120034372
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      120034372
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      120034372
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 120034372
NCBI-ProteinID: XP_038836829
UniProt: A0A8U0U1E6
LinkDB
Position
Sna41:complement(11299797..11303671)
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgatacgccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctcccgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

DBGET integrated database retrieval system