Salvelinus namaycush (lake trout): 120034954
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Entry
120034954 CDS
T07522
Name
(RefSeq) GTP-binding nuclear protein Ran-like
KO
K07936
GTP-binding nuclear protein Ran
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03008
Ribosome biogenesis in eukaryotes
snh03013
Nucleocytoplasmic transport
snh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120034954
03008 Ribosome biogenesis in eukaryotes
120034954
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
120034954
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120034954
03009 Ribosome biogenesis [BR:
snh03009
]
120034954
03016 Transfer RNA biogenesis [BR:
snh03016
]
120034954
03036 Chromosome and associated proteins [BR:
snh03036
]
120034954
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120034954
04031 GTP-binding proteins [BR:
snh04031
]
120034954
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120034954
Ribosome biogenesis [BR:
snh03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120034954
Pre-60S particles
120034954
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120034954
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
120034954
Spindle formation proteins
120034954
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120034954
GTP-binding proteins [BR:
snh04031
]
Small (monomeric) G-proteins
Ran Family
Ran
120034954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
RNA_helicase
Gtr1_RagA
G-alpha
ArgoMid
AAA_24
Septin
AAA_33
Pox_A32
AAA_22
AAA_7
TsaE
Motif
Other DBs
NCBI-GeneID:
120034954
NCBI-ProteinID:
XP_038837599
UniProt:
A0A8U0U3F2
LinkDB
All DBs
Position
Sna42:6450741..6461150
Genome browser
AA seq
213 aa
AA seq
DB search
MAEPDVQFKLVLCGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTTRGTIKYNV
WDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNK
VDIKDRKVKAKSIVFHRKKNLQYYDISAKSNYNFEKPFLWLARKLVGDPNLEFVEMPALA
PPEVVMDASLAAQYENDLKVAAETALPDEDDDL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaccagatgtacaatttaagctagtgttgtgtggagatggaggcacaggaaaa
accaccttcgtgaagaggcatttaacaggagagtttgagaagaaatacgttgcgactctg
ggagtagaggtgcaccccttggtcttccacaccactcgagggaccatcaagtacaacgtc
tgggacacagccggccaggagaagtttggggggctcagagatggctactacatacaggcc
cagtgtgcgatcatcatgttcgacgtgacatctcgcgtcacctacaagaacgtgcccaac
tggcaccgtgacctggtgcgcgtctgcgagaacatacccatagtcctgtgcggcaacaag
gtggacatcaaggacaggaaggtcaaagccaagagcatcgtgttccaccgcaagaagaac
cttcagtactacgacatctcagccaagagtaactacaactttgagaagcccttcctgtgg
ctggccaggaagctggtaggagaccccaacttggagtttgtggagatgcctgccctcgct
cccccggaggtcgtcatggacgcctccctggccgcgcagtacgagaacgaccttaaagtt
gccgcagaaacagcgctcccagatgaagacgatgacctttaa
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