KEGG   Salvelinus namaycush (lake trout): 120035355
Entry
120035355         CDS       T07522                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04145  Phagosome
snh04514  Cell adhesion molecules
snh04672  Intestinal immune network for IgA production
snh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120035355
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120035355
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120035355
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120035355
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120035355
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120035355
  Exosomal proteins of epithelial cells
   120035355
  Exosomal proteins of breast milk
   120035355
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_3 Ig_2 C2-set_2 C2-set_3 I-set
Other DBs
NCBI-GeneID: 120035355
NCBI-ProteinID: XP_038838057
UniProt: A0A8U0PXV0
LinkDB
Position
Unknown
AA seq 244 aa
MNLCVAIVVLTAVVCTSAEIPHETVYVLGCLEKTKVEAEAELQVDGEEVVYADFQSGQEV
WTLPEFLGPFPSSTVRNFYKNAVKGRRLCWDALALWILEEKGPPEVKDAPESTIYPRDEE
ELGVENTLICFANHFYPPPVKVNWTKNGLEVTEGASLSRYYPNEDGTFHQLSSLSFTPQE
GDVYACTVEHTALEDPKTRFWEYKVREVSGSSAGPAVFCGVGLTLGLLGVATGTFLYVKG
QQFN
NT seq 735 nt   +upstreamnt  +downstreamnt
atgaacctctgtgtggctattgtcgttctcactgcggtcgtctgcacttcggcagaaatt
cctcatgagaccgtctatgtgctgggctgtcttgagaagacaaaggtggaggcggaggca
gagcttcaggtggatggggaggaagtggtatatgctgacttccagagtggacaggaagtt
tggacattgcctgagttcctggggccattcccaagctctactgtccgtaacttctacaag
aatgccgttaaaggcagacgattgtgttgggatgccttggctctttggatattagaagaa
aagggtccacctgaggtaaaagatgcccctgagagcaccatctaccccagggatgaggag
gagctgggggtggagaacacccttatctgctttgccaatcatttctaccccccgcctgtc
aaagtcaactggaccaagaatggcctggaggtgactgagggagcgtctctcagtcggtac
tatcctaatgaagatggaacgttccaccagctctccagcctgagtttcactccacaggag
ggggatgtctatgcctgcactgtggagcacacagccttggaggaccccaaaaccaggttc
tgggagtataaggtacgtgaggtgagtgggtccagtgctggtcctgctgtattctgtgga
gtgggcctgactctgggactgttgggagtggctaccggaacattcctgtacgtcaaagga
caacagttcaactga

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