KEGG   Salvelinus namaycush (lake trout): 120037498
Entry
120037498         CDS       T07522                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, E-S beta chain-like
  KO
K06752  MHC class II antigen
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04145  Phagosome
snh04514  Cell adhesion molecules
snh04672  Intestinal immune network for IgA production
snh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    120037498
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120037498
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    120037498
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120037498
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120037498
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120037498
  Exosomal proteins of epithelial cells
   120037498
  Exosomal proteins of breast milk
   120037498
SSDB
Motif
Pfam: C1-set MHC_II_beta C2-set_2 Ig_3 C2-set_3
Other DBs
NCBI-GeneID: 120037498
NCBI-ProteinID: XP_038839453
UniProt: A0A8U0QAK1
LinkDB
Position
Unknown
AA seq 246 aa
MSMPLAFYICLTLFLSIFSGTDGYFDQRVTQCRYSSKDLHGIEFIDSYVFNQVEDIRFNS
TVGKYVGYTEHGVKNAEAWNKGSELAQELGELERYCKPNAAIYYSNVLDKTVEPHVRLSS
VTPPSGRHPAMLMCSAYDFYPKPIRVTWLRDGHEVKSDVTSTEELANGDWYYQIHSHLEY
TPKSGEKISCMVEHISLTEPMMYHWDPSLPEAERNKIAIGASGLVLGTVLALAGLIYYKK
KSSGVL
NT seq 741 nt   +upstreamnt  +downstreamnt
atgtcgatgccacttgccttctacatttgcctgactctgtttttgtccatattctctgga
acagatggatattttgatcagagggtgacacagtgccgatactcctcaaaggacctgcat
ggtatagagtttatagactcttatgttttcaatcaggttgaagacatcagattcaacagc
actgtggggaagtatgttggatacactgagcatggtgtgaagaatgcagaagcatggaac
aaaggttctgagctggctcaagagctaggggagctggagcgttactgcaagcctaacgct
gctatctactacagcaacgtactggataagacagttgagccccatgtcagactgagctca
gtgactccccctagtggcagacaccctgccatgctgatgtgcagcgcctatgacttctac
cccaaaccaatcagagtgacctggctgagggacggacatgaggtgaagtctgatgtgacc
tccactgaggagctggctaacggggactggtactaccagatccactcccacctggagtac
acacccaagtctggagagaagatctcctgtatggtggagcacatcagcctgactgagccc
atgatgtatcactgggacccgtccctgcctgaggctgagaggaataagatcgcgatcggg
gcgtctggtctggtgctgggaaccgtcttggcattagcaggactgatctactacaagaag
aagtcttctggggtgctctag

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