Salvelinus namaycush (lake trout): 120039801
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Entry
120039801 CDS
T07522
Name
(RefSeq) 72 kDa type IV collagenase-like
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
120039801
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120039801
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
120039801
Peptidases and inhibitors [BR:
snh01002
]
Metallo peptidases
Family M10
120039801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
120039801
NCBI-ProteinID:
XP_038841103
UniProt:
A0A8U0QDP4
LinkDB
All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MGCQTAFSPRHLVLKVFLVQLLAFLQKTSAAPSPIIKFPGDDSPKTDKEVALHYLNKFYG
CPQDRCNLMVLKDTLKKMQKFFSLQETGEIDPKTVEIMKKPRCGVPDVAQYNFFHRKPKW
QQNAITYRILGHSPDLDEETIDDAFLRAFKVWSDFTPLKFTRLMDGEADIMINFGRNEHG
DGYPFDGKDGLLAHAFAPGPGTGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFMF
MGKEYNSCTNQGRDDGFLWCSTTYNFDDDGKYGFCPHELLFTLGGNADGAPCKFPFTFQG
ENYDGCTTQGRDDGYRWCATTENYDNDKSYGFCPETAMSTVGGNSEGSPCVFPFTFLGDT
YDSCTASGRSDGKMWCASTKSYDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDPGA
LMAPMYTFTKNFRLSNDDIKGIQELYGAGTDKPVPPTQGPVTPMDICNEPVVFDAVAQIR
GETFFFKDRFIFRSTNFRGKPSGPMLVATYWPELPVTIDAAYENPLEEKTVFFAGNEMWI
FNADQIEKGYPKRISSIGLPTDLKGIDAAFSFGKSQKTYLFAGDKFWRYNEAKKKMDPGF
PKLIADSWNGIPDGIDSAFSLNGIDYTYFFKGAHYFKMDDSSLKIVKLGEITKDWLGCH
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggggtgccagacggcatttagcccccgacaccttgtcctcaaagtgttcttggtacag
ttactcgcctttctccagaaaacctctgcagccccctcgcccattatcaagttcccagga
gacgatagtccaaaaacagacaaagaagtggctctgcactatctgaacaagttctatggc
tgcccacaagacagatgtaatctcatggtgctgaaggacaccctgaagaagatgcagaag
ttcttctcgctgcaagagacgggcgagatcgaccccaagacagtggagatcatgaagaag
ccccgctgtggagttcctgatgttgcccaatacaacttcttccacaggaaacccaagtgg
cagcaaaacgccatcacctacaggattctaggccactctcctgacctggacgaggagact
attgatgacgccttcttaagggccttcaaagtgtggagtgacttcaccccactcaagttc
acccgcctcatggatggagaggctgacatcatgattaactttggccgcaacgagcatggt
gatggctaccccttcgatggtaaagatggtctgctggctcatgcctttgctcctggacca
ggcaccgggggagactcccactttgatgacgacgagcagtggaccctgggagaaggacaa
gttgtgaaggtgaagtttggtaatgcagagggggagttctgtaagttccccttcatgttt
atggggaaggagtacaacagctgtaccaatcagggccgtgatgatggattcctctggtgc
tccaccacatacaactttgacgacgacggcaaatacggtttctgtccccatgagttgctg
ttcaccctgggtggaaacgcggacggagctccctgtaagttccccttcactttccaaggg
gagaactatgatggttgcaccactcaggggcgtgacgacggctaccgctggtgtgctacg
actgagaactatgacaatgacaagtcctacgggttctgccctgaaacagccatgtccacc
gttggaggaaactctgagggttccccctgtgtgttccccttcacgttccttggagacact
tatgacagttgcaccgcttctggacgtagcgacggcaagatgtggtgcgcctccaccaag
agctacgacgatgaccgcaagtggggcttctgtcctgatcaaggctacagtctgttcctg
gttgcggcccatgagtttggccatgccctgggcttggagcactcccaggaccctggcgct
ctgatggcccccatgtacaccttcaccaagaactttagactgtccaacgacgacatcaag
ggcatccaggagctctatggtgctggtacagacaagcccgtgcctcccacccagggccca
gtcactcctatggacatctgtaatgaacctgtggtgtttgatgctgtggcccagatcaga
ggagagaccttcttcttcaaggacaggttcatattcaggtcaaccaacttccggggcaag
ccttcgggtcccatgctggtagccacctactggcctgagctccctgtcaccatcgacgct
gcctatgagaacccactggaggagaagactgtgttctttgcaggcaatgagatgtggatc
ttcaatgcagaccagatagagaaaggctaccccaagagaatctcctctataggcctgccc
acagacctgaaaggcattgacgcagccttctcctttggaaagagccagaagacctacctg
ttcgctggagacaagttctggaggtacaatgaagccaagaagaagatggaccctggcttc
cccaagctcatcgctgactcctggaatggaatcccagacggcattgactctgcctttagt
ctgaatggcatcgattacacctacttcttcaaaggtgcccactacttcaaaatggatgac
agtagcctgaagatcgtcaaactgggcgagattacaaaggactggctgggttgtcactaa
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