Salvelinus namaycush (lake trout): 120043945
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Entry
120043945 CDS
T07522
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120043945
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120043945
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Paralog
GFIT
Motif
Pfam:
TRPM2
LSDAT_euk
YVC1_C
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
120043945
NCBI-ProteinID:
XP_038844471
UniProt:
A0A8U0UA71
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Position
3:complement(57587770..57658567)
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AA seq
1264 aa
AA seq
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MKDTDKRHEGGGRRTGTEKSEKDQSWIPKIIKMRVCTTFVEDLSSNGVLCQCGGVRETHG
SIATGDFFGAAIVSQWDSSQHSSEYPTDAFGELEFAGAGRRHSHFLRLSCDTPPHIMYGL
MTAHWGVPSPNLVVSVVGGGGGREKVKPWVREVLRQGLVRAAQSTGAWIVTGGLREGVGR
CVGEAVRDHAAAASSLSQKKVIAVGVAPWGLVHNRQQLINSEGSFPARYYVQNTSHDSCC
LDSNYQAFLLVDDGSVGRRGGETAFRAKMEDYISHQRTGIWGSGSIDVPVLCMLISGDAA
MLERVDLSLKKATPWLVLNGSGPAADLICELLDVLSAGPMSPPSPQPEGEGSEKPSAELR
DRARERVRRHFPAKADVEKLVDRALSIYKNRDLITVFHGEQESPDDFDTVLLKALVRASK
RVSSDASEYTEELKLAVAWNRVDIAKSELFNGDIQWKYEDLEDSMTDALINDKPQFIRLF
NENGLNILDYLTYRHLEVLYRSLSDSSLAFTLLQRLLTERKGLAICSPKEALALKSPQNP
MSPLSGPSSVKELSLYEVSRLLWDILGDVCEPFYYSLLGLDQTSTTRRALKQVNKLLEGD
CSYREQSCLYPWASLFIWAVLQNRSEMAVYFWEMAGESVHSALAGCKILRELSKLESETE
TKLSMKELAQKFENLALDVFSECYQSSESRSFTLLIRQSPVWGKATCLQMATSADARHFF
SHDGVQSLLSQIWWGDMKRSTKVWKLVLSFFLPPLIYTNLITFRLKEQEHEEEVKEEEEA
PHGRDTESLDGANATMLSLSDIMQTEEDVEEYAALRANLKSAPSNPKRPFILLRWREFWF
APVTSFLGNVLMYFLFLILFAYILLLDFKPPPPHGPSTLEFVLYFWVFTMVCEEIRQTFF
RGSTTLYQRMKLYIEDMWNKCDITAISLFALGMCCRMFPWSYEFGRAVLAVDYMVFTLRL
IHIFAIHKQLGPKIIIVEKMMKDIFFFLFFLAVWLLAYGVANQALLYSYDPRPGWIFRRV
FYRPYLHIFGQIPIHEMDADKLDEGIECTNNVTLVEAGAEPCMSTEHNWLVIILLVIFLL
VTNILLVNLLIAMFSHTFSKVQEHSDNYWKFQRYNLIVEYHSRPCLAPPFILISHIHLII
KRHIRKIPSTKIKHFVLEIHGREASRLNTWEAIQKENILFAQNKREREKDSERLKRTSVK
VDNVLKQMAEIRDHDRRLRTLETELEYCSSALSWMTEALSQSNLVKTTRPPPALRDLTSL
SPTS
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatacggataaacggcatgaaggaggcggaaggagaacgggaacagaaaaatct
gagaaagatcagagctggatccccaagatcatcaaaatgagagtttgcaccacgttcgta
gaggacttatcaagcaatggggtattgtgtcagtgtggtggtgtgcgggagacacacggc
tccatcgctacaggagactttttcggggcggccatcgtcagccaatgggacagctctcag
cactcctcagagtaccccaccgacgccttcggagagttggagttcgcaggggccggcagg
agacacagccatttcctgcgtttgtcatgcgacaccccacctcatatcatgtacggcctg
atgacggcccattggggggtgccctcccccaacctggtggtttctgtggtgggggggggg
ggtggtcgcgagaaggtcaagccctgggtcagggaggtgctgagacaggggctggtcagg
gcagcacagagcacaggggcgtggatagtgacgggggggctgagggagggggttggacgt
tgtgttggggaagcagtgagggatcatgcggctgcggcctcctccctgtcccagaagaaa
gtcatcgctgtgggcgtggccccctggggcctcgtgcacaacagacagcagctcattaac
tctgagggtagttttccagcacggtattatgtccagaacacgtcccatgactcgtgctgc
ctggatagtaactaccaggccttcctgttggtggatgatgggagtgtaggccggcgggga
ggggaaacggccttccgggccaagatggaggactacatctcccaccaacgcaccggcatc
tggggtagtggcagtatagatgtccctgtattgtgtatgctcatctcaggggacgctgcc
atgctggagagggtggatctctctctgaagaaggctactccctggctggtgttgaatggt
tctggtccagcggcggatctcatctgtgagctgctggatgtactgtcagccgggcccatg
agccccccctctccccagccagagggtgaggggagcgagaagcccagtgcggagctgcgc
gacagagcccgtgagagggtccggagacacttccctgccaaggcagacgtggagaagctg
gtggacagggctctgagtatctataaaaacagagatctgatcacagtgttccacggggag
caggagagtcctgatgattttgacacagtgctactgaaggctctcgtcagagccagtaaa
cgtgtgtcaagcgatgccagtgagtacacagaggagctgaagctagcagtagcctggaac
agggtggacatcgctaagagtgaactcttcaatggagacatccaatggaagtacgaggac
ctggaggactccatgacggatgcgctgatcaacgacaagccccagttcatacgtctcttc
aacgagaacggcctcaacatcctggactacctaacctacaggcatctggaggtcctgtac
cgctcactgtccgacagttctctggccttcactctgctccagcggcttctcacagagaga
aagggcctggccatatgctctccgaaagaggccttagccctcaagagcccccagaacccc
atgagccccctatcaggaccctcctctgtcaaagagctcagcttgtatgaggtgtcacgg
cttctatgggacatcctgggagatgtgtgtgagcccttctactacagtcttctcggtttg
gaccagacctccaccaccaggagagcactgaagcaagtgaataagttgttggagggggat
tgttcgtacagggagcagagctgtctctatccgtgggcctctctgttcatctgggctgtg
ctgcagaaccgcagcgagatggccgtctacttctgggagatggcaggggagtctgtccac
agtgctctggcaggctgtaagattctgagggagctgtctaagctggagagtgagacggag
accaagctctctatgaaggagctggcccagaagtttgagaacttggcccttgacgtgttc
agtgagtgctaccagagcagtgagagccgctctttcaccctccttataaggcagtctccg
gtgtggggcaaagctacctgtctacagatggccacctcagctgacgcccgccacttcttc
agccacgatggcgtgcagtctctgctgtctcagatctggtggggagacatgaagaggagc
acgaaggtctggaaactggtcctctccttcttcttaccccccctcatctacaccaacctc
atcactttcaggttaaaggaacaggaacatgaggaagaggtaaaggaggaggaggaggca
cctcatggtcgagacacagagagtctggacggagcaaatgccactatgctctccctctcc
gacatcatgcaaacggaagaggatgtcgaggaatatgctgctctaagggccaatctgaaa
agtgccccctccaatcccaagaggcccttcatattgctgcgctggagggagttctggttt
gcgcccgtcacctcgttcctaggcaacgtgttgatgtacttcctgttcctcatcctgttt
gcttatatcctattgttggacttcaagcccccgccgcctcacggcccgtccaccttagag
tttgttctatacttctgggtcttcaccatggtctgtgaggagattcgacagacattcttc
aggggcagcaccactttatatcagagaatgaagctctacatcgaggacatgtggaataag
tgtgacatcacagccatctcactctttgcactgggaatgtgctgcagaatgttcccgtgg
tcctatgagtttggccgtgctgtgttggctgtggactacatggtgtttaccctccgtctc
atccacatcttcgccatccacaaacagctgggacccaagataatcattgttgaaaaaatg
atgaaagacatcttcttcttcctgttcttcctggcggtatggctcctggcctacggcgta
gccaatcaggcgctgctctactcctacgacccccgtcccggttggatatttcgcagagtg
ttctacaggccatacctccacatatttggacagatccccatacacgaaatggatgctgat
aaactggacgaggggatagagtgcaccaataacgtcaccctggttgaggcgggggcagag
ccctgcatgagtaccgaacacaattggctggtgatcatcttattggtcatcttcctgctg
gtcaccaacatcctcctggtcaacctgctcatcgccatgttcagtcacacgttctccaaa
gtgcaggaacacagcgacaactactggaagttccagcgttacaatctgatcgtggagtac
cactccagaccctgcctggcaccacccttcatcctcatctcccacatccacctcatcatc
aagagacacatccgcaagatcccctccacaaagatcaaacactttgttctggagatccac
ggtagggaggccagtagactgaacacgtgggaggccatccagaaggagaatatactgttt
gcccagaacaaacgagagagagagaaagactcagagagactcaaacgtacctccgtcaag
gtggacaatgtattaaagcagatggcagagattcgggaccacgaccgcaggctgagaacg
ttggagaccgagttggagtactgttctagtgccctctcctggatgacggaggctctctct
cagagtaacttggtaaagaccacacgtcctccgcccgctctcagagatctgacctctctt
tctccaactagctga
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