Salvelinus namaycush (lake trout): 120044050
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Entry
120044050 CDS
T07522
Name
(RefSeq) transient receptor potential cation channel subfamily M member 4-like
KO
K04979
transient receptor potential cation channel subfamily M member 4
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120044050
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
120044050
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
Motif
Other DBs
NCBI-GeneID:
120044050
NCBI-ProteinID:
XP_038844569
UniProt:
A0A8U0U8Q7
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Position
Sna3:complement(78802357..78853399)
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AA seq
1203 aa
AA seq
DB search
MRSWIPNIIRKRVCTTFVEDSLSNGALCQCGGMRETHGSNATGDYFGAAIVSQWDSSQHS
SEYPTDAFGELEFAGAGRRHSHFLRLSCDTPPQIVYSLMTAHWGVPSPNLVVSVVGGGGC
EKVKTWVREVLRQGLVKAAQRTGAWIVTGGLREGVGRCVGEAVRDHAAAASSLSQKKVIA
VGVAPWGLVHNREQLVNTQGSFPARYYVQNASRDSCCLDNNYQAFLLVDDGSVGRRGGDT
AFRSKMEDYISHQCTGIWGSGSIEIPVLCMLISGEAAMLKRVDLSLRKATPWLVLNGSGP
AADLICELLDALSAVPMSRTSPPPEVEGSESPSAELREWTRERVKRHFPAEADREKLVDR
ALSIYQNRDLITVFHGEQDSPDDFDTVLLKALVRASKRVSSAASEYTEELKLAVAWNRVD
IANSELFNGDIQWRYEDLEDSMTDALINNKPQFVRLFTENGLNILDYLTYQRLEGLYRSL
SNSSLAYTLLQRHLTERQSLARSLPTVPCSLDEPIPLKRPQSHMSPISGPSSAKELSLYE
VSRLLWDILGDVCQPFYYSPLGLDQSTSTWRTLKQVNKLLLGDCPYREQHCVYPWASLFI
WAVLQNRSEMAVYFWEMAGESVLSALAGCKILRELSKLESETAAKLSMKELAQKFENLAN
DMFSECYQSSESRSFNLLIRQSLVWGEATCLEMATAADARLFFSHDGLQSLLSQIWWGDM
ERSTEVWKLILTFFLPPLIYTNLISFRVNLKGAPSNPKRSFILLRWREFWFAPVTAFLGN
VLMYFLFLSLFAYVLLLDFKPPPPHGPSTLEFVLYFWVFTLVCEEFRQTFFRGSTTLYQR
MKLYIQDMWNKCDITAISLFALGMCCRMFQWSYEFGRAVMAVDYMVFTLRLIHIFAIHKQ
LGPKIIIVEKMMKDVFFFLFFLAVWLMAYGVANQALLYSYDPRPGWIFRRVFYRPYLQIF
GHIPIHEMDADKLEEGIECTNNVTLIEAGAEPCTSTYANWLVVILLVIFLLVTNILLVNL
LIAMFSYTFSKVQEHSDTHWKFQRYNLIAEYHSRPCLAPPFIILSHLHLFIKRHIRRIPS
VKIKHFVLDIRGRQASRLNTWEAIQKENILSAQNKREREKDSERLKRTSVKVDSVLKQMA
EIRDHGRRLRMLETELEYCSSSLSWMVQAFSQSNLLKPTRPPPALRDLTLQLADPSLMEN
NEI
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctggatccccaacatcatcaggaagagagtatgcaccacattcgtagaggac
tctttaagcaatggggcattgtgtcagtgtgggggcatgcgggagactcacggctccaac
gctacgggagactatttcggagccgccatcgtcagccagtgggacagctcccagcactct
tcagagtaccccaccgacgccttcggagagctggaattcgcaggggctggcaggagacac
agccatttcttgcgtctgtcatgtgacaccccacctcagatcgtgtacagtctgatgacg
gcccattggggggtgccctcccccaacctggtggtttctgttgtggggggtggggggtgc
gagaaggtcaagacctgggtcagggaggtgctgagacaggggctggtcaaggcggcacag
agaaccggggcgtggatagtgacgggggggctgagggagggggtgggtcgttgtgttggg
gaggcagtgcgagatcatgctgctgcggcttcctccctctcccagaagaaagtcattgct
gtgggcgtggctccctgggggctggtgcataacagagagcagctagttaacacacagggt
agtttcccagcgcggtattatgtccagaacgcatcccgtgactcgtgctgcctggataat
aactaccaggccttcctgctggtggatgatgggagtgtaggccggcggggaggggatacg
gccttcaggtccaagatggaagactacatctcacaccagtgcactggcatctggggtagt
ggcagtatagagattcctgtgctgtgtatgctcatctcaggggaagctgccatgctgaag
agggtggatctctctctgaggaaggctactccctggctggtgttgaatggttctggtcca
gcggcagaccttatctgtgagctgctggatgccttgtcagctgtgcccatgagccgcacc
tctcccccgccagaggttgaggggagcgagagccccagcgcagagctgcgcgaatggacc
cgtgagagggtcaagaggcacttccctgccgaggcagaccgggagaagcttgtggacagg
gctctgagtatctatcagaacagagatctgatcacagtgttccacggggagcaggacagt
cctgatgattttgacactgtgctactgaaggctctggtcagagccagtaaacgtgtgtcc
agcgccgccagtgagtacacagaggagctgaagcttgcagtagcctggaacagggtggac
atcgctaacagtgaactcttcaacggagacatccaatggagatacgaggacctggaggac
tccatgacggacgcactgatcaacaacaagccccagtttgtacgtctcttcaccgagaat
ggtctcaacatcctggactacctgacctaccagcgtctggagggcctgtaccgctcgctg
tccaacagctctctggcctacacgcttctccagcgacacctcacagagaggcagagcctg
gccagatcccttcccactgtcccctgctctctggacgagcctatacccctcaagaggccc
cagagccatatgagccccatatcaggaccctcctctgccaaagagctcagcttgtatgag
gtgtcgcggctactatgggacatcctgggagatgtatgtcagcccttctactacagtcct
ctgggtttggaccagagcaccagcacctggagaacactgaagcaagtgaataagttgtta
ctgggggattgtccgtatagggagcagcactgtgtctatccctgggcctctctgtttatc
tgggctgtgctgcagaatcgcagcgagatggctgtctacttctgggagatggcaggggag
tctgtcctcagtgctctggcaggctgtaagattctgagggagctgtctaagcttgagagt
gagacggcggccaagctctctatgaaggagctagcacagaagtttgagaacttggccaat
gatatgttcagtgaatgctatcagagcagtgagagtcgctctttcaacctccttataagg
cagtctctggtgtggggcgaagctacctgtctggagatggccaccgcagccgatgcccgc
ctcttcttcagtcacgatggcttgcagtctctgctgtctcagatctggtggggagacatg
gagaggagcacggaggtctggaaactgatcctcaccttcttcttaccccccctcatctac
accaacctcatcagcttcagggtcaatctgaaaggtgccccctccaatcctaagaggtcc
ttcatactgctacgctggagggagttctggtttgcgcccgtcacggcgtttctaggcaac
gtgctgatgtacttcctgttcctcagcctgtttgcttacgtcctattgttggacttcaag
cccccgccccctcatggcccgtccaccttagagtttgttctctacttctgggtcttcacc
ctggtctgtgaggagtttcgacagacgttcttcaggggcagcactactttatatcagagg
atgaagctctacatccaggacatgtggaataagtgtgacatcacagccatctcactcttt
gcactgggcatgtgctgcagaatgttccaatggtcctatgagtttggccgggctgtgatg
gctgtggactacatggtgtttaccctccgtctcatccacatattcgccatccacaaacag
ctgggacccaagatcatcatcgttgaaaaaatgatgaaggacgtcttcttcttccttttc
ttcctggcggtgtggctcatggcctacggcgtagccaatcaggcgctgctctactcctac
gatcctcgtcccggttggatcttccgccgagtgttctacaggccatacctgcaaatattt
ggacatatccccattcatgaaatggatgctgataaactggaggaggggatagagtgcacc
aataacgtcaccctgatcgaggcaggtgcagagccctgcacgagtacctatgctaactgg
ctggtggtcatcttattggtcatcttcctgctggtcaccaacatcctgctggtcaacttg
ctcattgccatgttcagttacacattctccaaagtgcaggagcacagcgacacccactgg
aagttccagcgctacaacttgatcgcagagtaccactctagaccctgtctggctccaccc
ttcatcatcctctcccacctccacctcttcatcaagagacacatccgcaggatcccctct
gtcaagatcaaacactttgttctggatatccgtggcaggcaggccagtagactgaacaca
tgggaggccatccagaaggagaacatactgtctgcccagaacaaacgagagcgagagaaa
gactctgagagactcaaacgcacctctgtcaaggtggacagtgtcctaaagcagatggca
gagatccgggaccacggccgcaggctcagaatgctggagacagagttggagtactgttct
agttccctctcctggatggtgcaagctttctctcagagtaacttgctaaagcccacacgt
cctcctcccgctctccgagatctaactctccaactagctgacccaagtctgatggagaat
aatgaaatctag
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