Salvelinus namaycush (lake trout): 120044373
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Entry
120044373 CDS
T07522
Name
(RefSeq) H-2 class II histocompatibility antigen, A-Q alpha chain-like
KO
K06752
MHC class II antigen
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04514
Cell adhesion molecules
snh04672
Intestinal immune network for IgA production
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120044373
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120044373
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120044373
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120044373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120044373
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120044373
Exosomal proteins of epithelial cells
120044373
Exosomal proteins of breast milk
120044373
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
Ig_3
MHC_II_alpha
ig
C2-set_2
Ig_2
Snurportin1
Motif
Other DBs
NCBI-GeneID:
120044373
NCBI-ProteinID:
XP_038844927
UniProt:
A0A8U0QLX3
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Position
Sna3:43320338..43327382
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AA seq
265 aa
AA seq
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MSFEMNYSVIILILTGAVCTSAEIHHEIHFIYGCFESSDPAVGLEIDGDEVFYGDFNKNS
NTCLIADVVFTLPTFISITPEDKERACEYATISRVWCKNSIAWGKLSEPRIPKFKDAPES
TIYPRDEVELGVENTLICFVNDFFPPPVKVNWTKNGMEVTEGLSLSRYYPNKDGTFHQFS
RLSFTPQKEDVYICAVAHTALKDPKTREYKVSGSSAGPGPAVFCGVGLTLGLLGVATGIF
FIYKGKRATESQEKRWEVRHWTREI
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcgagatgaactactctgtgattattctgattctcactggagccgtttgcact
tctgcagaaattcatcatgaaattcactttatctacggatgctttgagtcaagtgatcct
gcggtgggacttgagattgatggagatgaagtcttctatggtgacttcaataaaaacagt
aatacatgtctaatagcagatgtagtgtttacattacctacattcatatctattacacca
gaggataaagaaagggcttgtgaatatgctaccattagcagagtttggtgcaaaaacagc
atcgcatggggcaaactgtctgaaccgagaataccaaaattcaaagatgcccctgagagc
accatctaccccagggatgaggtggaactgggagtggagaacaccctcatctgctttgtg
aatgatttctttcccccgcctgtcaaagtcaactggaccaagaatggaatggaggtgact
gagggattatctctcagtcgttactatcctaataaagatggaacgttccaccagttctcc
aggctgagtttcaccccacaaaaggaagacgtctacatctgcgctgtggcgcacacagcc
ctgaaggaccccaaaaccagggaatataaggtcagtgggtccagtgctggtcctggtcct
gctgtattctgtggagtgggcctcactcttgggctgctgggggtggctactggaatattc
ttcatctacaaaggaaagagagccactgagtctcaggaaaaaagatgggaagtgaggcac
tggactagagagatctag
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