Salvelinus namaycush (lake trout): 120044539
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Entry
120044539 CDS
T07522
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00514
Other types of O-glycan biosynthesis
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120044539
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120044539
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120044539
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120044539
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120044539
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
FXMRP1_C_core
Motif
Other DBs
NCBI-GeneID:
120044539
NCBI-ProteinID:
XP_038845124
UniProt:
A0A8U0U997
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Position
Sna3:69446210..69454244
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AA seq
380 aa
AA seq
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MSKSYGKKTVVSITSAVFTCLMLLLVVAQHQRVQVDEVPNQREMGTRSLQSMDTVATDGV
KADQQQVNSEAQAKKGFSAYFSKLTRGRREADKPAGSAQSATDASPAEDISADDIFIAVK
TTKKFHQSRLNLLLDTWISRNMQQTYIFTDGEDEELKKKVGSHAINTNCSAAHSRQALSC
KMAVEYDKFIESGKKWFCHVDDDNYVNMRTLVKLLSHYPHTQDMYIGKPSLDRPIEATER
LGDNKMRPVNFWFATGGAGFCVSRGLALKMSPWASGGHFMNTAEKIRLPDDCTIGYIIES
VLGVPLTRSNFFHSHLENLQQVSRSELHKQITLSYGMFENKRNIINMKGAFPVEEDPSRF
KSVHCLLYPDTPWCPLQVAY
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaagttatggtaagaaaacggttgtttctataaccagtgcagtattcacctgc
cttatgttgctcttggtggtcgcgcagcatcaaagagttcaggtagacgaggttccaaac
cagagagagatggggacgcgctcactccagagcatggacaccgtggctacggacggagtg
aaggctgatcagcaacaggtcaactcggaggcgcaggcgaaaaaaggattctctgcgtat
ttttccaagttgacccggggacggagagaggcggacaagcctgcagggtccgctcagtca
gcgacagatgcgtcccccgcagaggacatcagtgcagatgacatcttcatcgctgtcaag
accacaaagaagttccatcagtctcgactgaatctccttctggatacctggatctctaga
aacatgcagcagacatacatcttcacagacggagaagatgaggagctgaagaagaaagtt
gggagtcacgccatcaacaccaactgttcagcagcacacagccgccaagctctatcctgc
aagatggctgtggagtatgacaagttcattgagtctgggaaaaagtggttttgtcacgtg
gatgatgataactacgttaacatgaggactctagtgaagctgctgtcccactacccccac
acccaggacatgtacattggcaagcccagcctggaccggcccatcgaggccacagagagg
ctaggagacaacaagatgagaccagtaaacttctggtttgctactgggggagccggcttc
tgtgtgagtcgaggcctggctttgaagatgagcccatgggccagtggcggccattttatg
aacacggcagagaagattcgtctgcctgacgactgcaccatcggctacatcattgagtcg
gtgctgggggtgcctctgacccgcagcaacttcttccactcccatctggagaacctgcaa
caggtgtccagatctgaacttcacaaacagatcacattgagttatggaatgtttgagaac
aagaggaacatcatcaatatgaaaggggctttccctgtggaggaagacccatcaaggttt
aagtctgtgcactgtttgctgtacccagacaccccttggtgcccgcttcaggttgcctac
tag
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