Salvelinus namaycush (lake trout): 120045796
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Entry
120045796 CDS
T07522
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120045796 (scn4aa)
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120045796 (scn4aa)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
IQCJ-SCHIP1
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
120045796
NCBI-ProteinID:
XP_038846656
UniProt:
A0A8U0QLN6
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All DBs
Position
Sna4:complement(23737769..23769069)
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AA seq
1873 aa
AA seq
DB search
MAPLLPPTGADAFRRFTPESLAEIERLMEEKRIAAEVEGYVDDGPSEPSKDLEAGKGLPM
IFGDAPTEMLNTPLEDIDPFYKAKKTFIVITKGNTIFSMFIMITILSNCFFMTMSDPPSW
SKTVEYVFTGIYTFEASCKVLSRGFVVGPFTFLRDPWNWLDFMVISMAYVTEFVDLGNVS
ALRTFRVLRALKTITVIPGLKTIVGALVQSVKKMVDVMILTVFALAVFALIGLQLFMGNL
RNKCVRWPILNSTVFDDYNSTSSLDGTMGFGETSNFTVPFDFKEYISNIENHYYLEGSLD
ALLCGNSSDAGRCPEGFMCIKAGRNPNYGYTSYDSFGWAFLSLFRLMTQDYWENLFQLTL
RAAGKTYMIFFVLVIFLGSFYLINLILAVVAMAYDEQNEATLKEAQDMEEEFQRLLEQYR
IQEQADAAAGSQATLTSRKELSHHSGSYGGSADDEQSLGDDVIKDCNGRIVPRLAIVPVS
SESEVSDELKEDSMFHLEQPGLKNRSASAVSVLTTVMEELEDAQKPCPPGWYKFADTFLK
WDCCVPWVWLKKWLLFIVMDPFVDLGITICIVLNTLFMAMEHYPMSPEFDHMLSVGNLVF
TGIFTAEMVFKLCAMDPYYYFQVGWNIFDSIIVTFSLVELGLANVQGLSVLRSFRLLRVF
KLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIATDC
ELPRWHMHDFFHSFLIVFRILCGEWIETMWDCMEVAGAGMCLVVFMMVMVIGNLVVLNLF
LALLLSSFSGDNLSSDDDGEMNNLQIAIGRINWGIDWVKAFVRHMVLQLLGKKATGDKEG
GEGIEGNPEKETFGLNHLDTCQDSKMADGMTNCVDGLQADGEMSLNVPIAQGEPDFENDD
DDSGSFTSDEENGHGDHVKLLGAVGDESSVCSTLDYVPEPEPVEEEEEEEPEPEEPEACF
TDGCIARWPCLTFDVSQGRGKKWWNLRRTCFTIVEHDYFETFIVFMILLSSGALAFEDIY
IERRRTIKIILEYADKVFTYVFIIEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLVTLGA
NWMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIF
SIMGVNLFAGKFYRCINTTTEELFPITEVNNRSDCLALQHATQEARWVNVKVNYDNVGLG
YLSLLQVATFKGWMDIMYAAVDSREVEEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKKKISAIFMTEEQKKYHEAMKKLGSKKPVKPIPRPTNMIQGAVFDFITQQFF
DIFIMVLICLNMVTMMVETDDQSEEKENVLYKINLAFIVVFTCECLLKMFALRHYFFTIG
WNIFDFVVVILSVAGIMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLFAL
MMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDIFNFQTFGSSIICLFEITTS
AGWDGLLLPILNSGPPDCDPDIENPGSDVRGNCGNPGMGIMFFCSYIIMSFLVVVNMYIA
IILENFNTAQEESGDLLCEDDFVMFEETWEKFDLEGTQFIEYAKLSEFCDTLQEPLRIAK
PNRIKLISMDLPLVTGDKIHCLDILLAVTQEVLGEGVEMTAMKVSIEAKFNMNNPTTDSY
EPITTTLRRKEEEAAAVIIQRAYRKHLLKRSILHASFMRRSKRQIRREENEEPPETEGLL
VRKMNVLYGSDLDLAAEMELAGLRAQPISVPLVSNRPSDLPKQTQTTRPEPGRPLLLVVP
VEVTSEVVLHSAPVTSDPPLDLPEQTQPSGSEPTGLEPTWPEPAGPNLLVFPVEVTPYSR
SHESIDNLRESIV
NT seq
5622 nt
NT seq
+upstream
nt +downstream
nt
atggcacccctgctccctcccacaggcgctgatgcgttccgccgcttcaccccggaatcc
ctggcagagatcgagaggctcatggaggaaaagcgaatagccgcggaagtagaagggtac
gtagatgatgggccgtcggagcccagcaaagacctggaagccggcaagggtctgcccatg
atctttggagacgccccaacggagatgctcaacacacctctggaggacatagaccccttc
tacaaagcaaagaagacctttatcgtcatcaccaaaggaaacacaatcttcagcatgttc
atcatgattaccattctgtcgaactgcttttttatgacgatgagcgacccaccgtcatgg
agtaaaactgtggagtatgtttttactggtatttatacatttgaggcctcatgcaaagtg
ttgtcaagaggctttgttgtcggaccttttacattccttcgagatccatggaattggctg
gatttcatggtgatcagcatggcgtacgtcacagagtttgttgatctaggaaacgtgtca
gcccttaggacgttccgtgtactccgagcccttaaaacaatcactgtgatacctggatta
aaaaccatcgtgggcgccctggtccagtctgtaaagaaaatggtagacgtgatgatcctc
actgtgttcgccctggccgtgtttgcactcatcggcctgcaactcttcatgggaaatttg
cgcaacaagtgtgtccgatggcccatcctcaactcaacggtgttcgacgattacaactcc
acctcgtcgcttgacggcaccatgggtttcggcgaaacatcaaatttcactgttcctttc
gatttcaaggagtacatcagcaatatagagaatcactactatttggaaggtagtctggat
gctcttctctgcggaaacagctctgatgctgggaggtgcccagaaggattcatgtgcata
aaggctgggagaaaccccaactacggctacaccagctacgactccttcggctgggccttc
ttgtccctcttcagactcatgacgcaggactactgggagaacctgttccaactgacactt
cgagcagcggggaagacgtacatgatcttctttgtgctggtcatcttcctgggttccttc
tacctcatcaacctcatcctggccgtggttgccatggcctacgatgagcagaacgaggcc
actctgaaagaggcgcaggatatggaggaggagtttcagaggcttctggagcaatacagg
atccaagagcaagctgatgctgctgctggaagtcaggcgaccctgaccagtcggaaagag
cttagtcatcactctgggtcatacgggggctctgcggatgacgagcagagcctcggagat
gatgttatcaaggactgtaatgggagaatcgtgccccgtctggccatcgtaccagtgtcc
tctgagtcggaggtcagtgacgagctcaaagaggacagcatgttccatctggagcagcca
ggcctgaagaacagatcggcgagtgctgttagtgttctcaccaccgtcatggaggagctg
gaagacgcccagaagccttgtccgcccggctggtacaagtttgccgacacgttcctgaag
tgggactgttgcgtgccctgggtatggttgaagaagtggttgctctttattgtgatggac
cccttcgtggacctaggcatcaccatctgcatcgtgctcaacaccctcttcatggccatg
gagcactaccccatgagcccagagtttgaccacatgctctccgtggggaacctggttttc
accgggatcttcacagcagagatggtcttcaagctttgcgccatggatccctactactac
ttccaggtcggctggaacattttcgacagtatcattgtcacgttcagtctggtggagtta
ggtctagccaatgtccaaggcctgtccgttctcaggtctttccgtttgctgcgtgtcttc
aaactagccaagtcgtggcccacgctcaacatgctgatcaagattattggcaactctgtg
ggcgctctgggcaacctgaccttggtgctggccatcatcgtcttcatcttcgccgtggtg
ggcatgcagctcttcggcaagagctacaaggaatgcgtgtgtaagattgccaccgactgt
gagttgccgcgttggcacatgcacgacttcttccactcattcctcatcgtgtttcgcatc
ctgtgcggggagtggatcgagaccatgtgggactgtatggaggtggccggagccgggatg
tgcctggtggtcttcatgatggtcatggtcatcggaaacctggtggtgctgaacctcttc
ctggccttgctgctcagctcattcagtggagacaacctgtccagtgatgacgacggtgag
atgaacaacctccagatcgccatcggcaggatcaactggggcatcgactgggtgaaagcc
tttgtccgccacatggtcctgcagctactgggcaaaaaagccaccggggacaaggaaggg
ggtgaggggatcgaaggaaaccccgaaaaggagacctttggactaaaccacttagacacg
tgccaggattccaagatggccgacgggatgaccaactgtgtggacgggcttcaggcagac
ggcgagatgagcctcaatgtgcccattgcccagggggagccggactttgagaacgatgat
gatgacagtgggtcttttacatcagatgaagaaaatggacatggtgatcacgtaaagttg
ttgggtgcagtgggtgacgagtcctcggtctgcagcacgctggactatgtacctgaacca
gagcctgtggaagaggaggaagaggaggagccagagccagaggaaccagaagcttgcttc
actgatggctgtatcgcgcgatggccgtgtctgacatttgacgtctctcagggcagaggc
aagaagtggtggaacctccgcaggacctgtttcaccatcgtggaacacgactactttgag
accttcatagtcttcatgatcctcctaagcagtggagctctggcttttgaggatatttac
attgagaggcgaagaactatcaaaatcatcctggagtatgcagacaaagtcttcacctat
gtctttatcattgagatgctcttaaaatgggtggcgtacggcttcaagacctacttcacc
aacgcttggtgttggctggacttcctaattgtggatgtttccttagtcactttaggagct
aactggatgggctactctgaacttggaccaatcaagtctcttcgaacactcagggctcta
aggccacttcgagccctgtcaagatttgagggaatgagggtggtggtaaacgctcttatc
ggcgccatcccctccatcttcaacgtgctgctggtgtgcctcatcttctggctcatcttc
agcatcatgggggtcaacctgtttgccggaaagttctaccgctgcatcaacaccaccacg
gaggagctgttccccatcaccgaggtcaacaacaggagcgactgccttgccctgcagcac
gccacccaggaagcccgctgggtcaacgtcaaagtcaactacgacaacgtgggcttgggc
tacctctctctgctgcaagtggccacatttaaaggctggatggacatcatgtatgctgca
gtggactctcgagaagtggaggagcagccctcgtatgagatcaacctctacatgtacatc
tactttgtcatcttcatcatcttcggctccttcttcaccctcaatcttttcattggtgtt
attattgacaatttcaaccagcaaaagaaaaagataagcgccatctttatgacagaggag
cagaagaaatatcatgaagccatgaagaaacttggctcgaagaagccagtgaagcctatc
ccaaggcctacgaacatgattcaaggcgctgtgtttgacttcatcactcagcagttcttt
gacatcttcatcatggtcctcatctgcctcaacatggtcaccatgatggtggagacggac
gaccaaagcgaggagaaggaaaacgtcctttacaagatcaacctggccttcatcgtagtt
ttcacctgcgagtgtctgctcaagatgtttgcccttcgccattacttcttcaccatcgga
tggaatatttttgattttgtcgtggtcatcctgtccgtcgcgggtataatgctgtcggac
atcatagagaagtactttgtgtcacccaccttgttcagggtcatcaggctggctaggata
ggcagggtcctgcgtctcatcaaaggtgccaagggcattcggacgctgttatttgcgttg
atgatgtcactccctgccctgttcaacatcggcctcctgctcttcctcatcatgttcatc
ttctccatattcggcatgtccaactttgcctatgtcaaaaaacaggcgggcatcgacgac
atcttcaatttccagacgttcggcagcagtattatctgcctgtttgagatcaccacctct
gcgggttgggatggtcttctgctgccaattctaaacagcggtcctccagactgcgaccca
gacattgagaacccgggctcggacgttcggggcaactgcggcaacccaggcatgggtatc
atgttcttctgcagttacatcatcatgtccttcctggtggtggtcaacatgtacatcgcc
atcatcctggagaacttcaacacggcccaagaggagagcggggacctgctgtgcgaggat
gactttgtgatgttcgaagagacctgggagaagttcgaccttgagggcacgcagttcatc
gaatacgccaagctgtcagagttttgtgacaccctgcaggaacccctgcgtatcgccaag
cccaaccggatcaagctgatctcgatggacctgcccctggtcacgggcgataagattcac
tgcctggacatcctgctggccgtcacccaggaggtgctgggcgaaggggtggagatgacg
gccatgaaggtgagcatcgaggccaagttcaacatgaacaaccccacgacagactcctac
gagcccatcaccaccacgctgcggcgcaaggaggaggaggcagcagccgtgatcatccag
cgggcttaccgcaagcacctgctcaagcgctcaatcctgcatgcctccttcatgcgccgc
tccaagaggcagataaggcgggaggagaacgaggagcccccggagacggagggacttctg
gtgcgaaagatgaacgtgctctatgggagcgacctggaccttgccgcagagatggaattg
gctgggttgcgagcacaacccatatcggtccctttggtgtccaatcggccatcggacctt
cccaagcaaacacagaccaccaggccggagcctggcagaccactcctcttggtggtcccc
gttgaggtcaccagtgaggtggtgttacactcagcccctgtgacgtctgatccaccattg
gacctcccagagcaaacacaaccatcagggtcggagcccacagggctggaacctacctgg
ccggagcctgctgggccaaacctcttggtgttccccgtagaggtcaccccctattcgcgt
agccatgagtcaatagacaacctgcgagagtcgattgtataa
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