Salvelinus namaycush (lake trout): 120045829
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Entry
120045829 CDS
T07522
Name
(RefSeq) stromal cell-derived factor 1-like
KO
K10031
C-X-C motif chemokine 12
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
snh04672
Intestinal immune network for IgA production
snh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120045829
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120045829
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120045829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120045829
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120045829
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Chemokines
120045829
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Chemokines
120045829
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IL8
DUF5580_M
Motif
Other DBs
NCBI-GeneID:
120045829
NCBI-ProteinID:
XP_038846689
UniProt:
A0A8U0UC39
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Position
Sna4:31875589..31907098
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AA seq
83 aa
AA seq
DB search
MSLPLMSAKPISLVERCWCRSTVNTVPQRNIRELKFLHTPNCPFQVIAKLKNHKEVCINP
ETKWLQQYLNNALNKMKKSKQTN
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgccgctgatgtctgctaaacccatcagtctggtggagaggtgttggtgtcgt
tctacagtcaacaccgtcccccagcgcaacatccgagaactgaagttcctacacacaccc
aactgccccttccaagtgattgccaagctgaagaaccacaaggaggtttgtatcaaccct
gagaccaagtggctgcagcagtacctgaataacgccctcaacaagatgaagaaatccaag
cagaccaactag
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