Salvelinus namaycush (lake trout): 120046229
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Entry
120046229 CDS
T07522
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04140
Autophagy - animal
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120046229
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120046229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120046229
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120046229
Membrane trafficking [BR:
snh04131
]
SNARE
SNARE associated proteins
Others
120046229
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
120046229
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Motif
Other DBs
NCBI-GeneID:
120046229
NCBI-ProteinID:
XP_038847211
UniProt:
A0A8U0QMP8
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All DBs
Position
Sna4:complement(16110215..16127495)
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AA seq
1062 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEAGGRSRKGGSRGPLPQPEFWSLLKTVTHGDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQAEALDLPFLTNRKESWDTVSQSSGGSDTVEVQRGG
PGVLGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKETWPCDL
EISNMEKNGNAKRPLKDVLADFRESAHSSQDSMREDSYVSTPGADHLSENTAFSGSDSET
QGHVTHLTGPSNPASLGSDQEEPSTKTHVPSNVYSHIEGPSSLSDCVESTSTTPHLPVTE
TPQEKKTEYSASEPSAHMNLHRTTSVLSRTVSTDSVAHSHSWISEDDIYKPHLEELADPD
DSLLGSGPACVNGFTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTVGMW
RDYYCELSPFEFRLYQNAEERTCCDNCSLLRCEDARVTSAEGRFDLSFPGKRLLMRAANR
DEAEDWVDRIAEAVNKCRPLNLIDDQWEVLQLSDSSVTPDEFPKSSPSSASSVPTSPERG
GTVVEQEQQLELDWTRPTDPESDAIKEAVLYFCQDSEARNWTPLVFSLSLETLKGFRMQD
GQKVLRFSHPIEGIRDVVPDVSLGGPAFFRVVTARDTLKLRAKSSEEARAWRGLIRGALD
SYLESGEDWEPESPGVAPGAGGNIHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQGFKCAG
CPKVMGVSRGKARLCEYSGQYYCDACHQGDTIVIPSRMVHNWDLAPREVSRRALKLLAQI
EHEPLLNLDLLNSDLWEHAEAMAQAQSLRQRLRLLGDYLLTCRSGACKNIQTRLGPRTYL
LESSHLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHASDIIFPF
QFDTTTRCKECKAVFHATCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggcgttgcagaagcgctacgtgacaaccgatgtc
gtggtgaccagcgaggatggtgacgccaacctgctgtgctgcgcactggaggccatcttt
atccatggcatcaagagcaaatatgttcgctccgaggccgggggacgcagcaggaaaggg
gggtcccggggacccctaccccaacctgagttctggagcctgctcaagacggtcactcac
ggtgatgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctgatggagtgctacctggcctccctg
ttccgcgagggctccaaactgcaggcccactaccagccctccgccctgcttctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggccgtgctcaacgagtggaccaccacccctctggctctggctggcctc
tgccctgccgcccaggctgaagcgctcgacctcccctttctcaccaatcgcaaggaatcc
tgggatacggtgtcacagtcgtccggcgggtcggatacggttgaagtgcagcgagggggg
ccaggggtactggggaaggggattgggggggtctcagggtttaagaccccactgaattca
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcaaggtcacgatcccaagagcccagacaaggagacctggccatgtgacctg
gaaatctccaacatggagaagaatggcaatgccaagaggcctctcaaagatgttctggca
gacttcagggagagtgcccattccagtcaggactccatgcgcgaggattcgtacgtgtcc
accccaggcgcagaccacctctctgagaacactgccttcagtggctccgacagcgagacc
caggggcatgtcacacatctcactggcccctctaaccctgcttcactggggtcagaccag
gaggagccttccactaagacccacgtcccctccaacgtgtactcgcacattgaagggccc
tccagtctcagtgactgtgtagagagcacatcgacaactcctcacctgcctgtcactgag
acgccacaggagaaaaaaactgaatattctgcctcggagccttcagcccacatgaaccta
caccgcactaccagcgtgctcagtcggacggtgtctacagactcagtcgcacattcccac
tcctggatctctgaggatgacatctataagccacaccttgaggaactggctgaccccgat
gactctttgctagggtctggcccagcttgtgtgaacggatttacctctccccctccagag
cccgagaccccccagtctccccccagcgtggttcaccgcaggcagataggcctctccaac
cctttccgcggactgctgaagctgggccacctggagcggcggggcacggtgggcatgtgg
cgcgactactactgcgagctctcgcccttcgaattccgactctaccagaatgcagaggag
cgtacctgctgcgacaattgctccctgctgcgttgcgaggacgcacgcgtcacctcggcc
gagggccgcttcgacctttccttccccgggaaaaggctcctcatgcgggcggccaaccgc
gatgaggccgaggactgggtagaccgcatcgctgaagccgtcaacaagtgccgcccgctt
aacctcatcgatgaccagtgggaggtgctgcagctctctgacagcagtgtaaccccggat
gaattcccaaaatcttccccttcatccgcctcctccgtacccaccagtcccgagcgaggg
gggactgtggttgagcaggagcaacagctggagctggactggacgcgtcccacagaccca
gagtcagacgccattaaggaagcggtgctgtacttctgccaggactccgaggcacgcaac
tggactcctctcgtcttctccctctccttagagactctcaagggcttccggatgcaagac
gggcagaaggtgctgcgcttctcccacccaatcgagggcatccgggacgtggtcccagac
gtttctctgggtggaccagccttctttagggtcgtaacggccagggatacgctcaagctg
agggccaagagctctgaggaggcacgtgcctggaggggcctcatcaggggagccctggac
tcctacctggagagtggagaagactgggagcctgagagccccggggtggcacctggggcg
ggagggaacatccacagactggtgcagcatagactgaagggggacggggtgctgctggcc
catctatgcacagtgcccacagagaagggactggaccttcagggcttcaagtgtgcaggt
tgtccaaaggtgatgggcgtttcccgagggaaagccagactgtgtgagtactcagggcag
tactactgcgacgcttgtcaccagggcgacaccatcgtcataccctcccgcatggtgcac
aactgggacctcgcacctcgggaggtctccaggcgtgcccttaagctgctggctcagatt
gaacatgagcccctgctgaaccttgaccttttgaactctgacctgtgggagcatgccgag
gccatggcccaggcacagagcctcagacagaggctgcgtctcctaggagactacctgctc
acctgccgcagcggagcatgcaagaacatccagaccagactgggtccaaggacatactta
ttagaatcaagccatctctacagtgtcatggacttacgacagatagcggagggaatgtat
gtggcctacctgaacactttgatccagtttgcctccaaccacgtccaccactgtgacctt
tgtacccagaggggcttcatctgccagatctgtcacgccagtgacatcatcttccccttc
cagttcgacactaccaccaggtgtaaagagtgtaaggccgtgtttcacgcaacctgcaag
gccaagtcgccttcctgtccacgatgcctgcgtcttcagaggtacctcgagagagatctg
caggactaa
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