Salvelinus namaycush (lake trout): 120046806
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Entry
120046806 CDS
T07522
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe-like
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00514
Other types of O-glycan biosynthesis
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120046806
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120046806
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120046806
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
120046806
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120046806
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fringe
Motif
Other DBs
NCBI-GeneID:
120046806
NCBI-ProteinID:
XP_038848249
UniProt:
A0A8U0UDJ3
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All DBs
Position
4:72876477..72938496
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AA seq
408 aa
AA seq
DB search
MHVSSMGVSKLCFLFSLALCALLLLIPTLQPSQHQGDLPQPRAHNKPARHPGHLVVPLQA
DMGKVTVGRNGIDGDSMGRSTPRETKRTVDGDWVYTARRADTQGTGKHTDSQTGSEGDFL
HRAGGVTGAGGSRPRNPLELKDIFIAVKTTRKYHKSRLDLLFQTWVSKAKEQTFIFTDGE
DQELRRRAGANVINTNCSAAHTRQALCCKMSVEYDKFIESQRKWFCHMDDDNYVIVPSLL
KLLSSYHHTQDVYLGRPSLDHPIEAAERVKSDGSVSVKFWFATGGAGFCISRGLALKMSP
WASLGNFISTAEKIRLPDDCTMGYIIEALLEVTLTHTHLFHSHLENLQRLPTDTVLEQVT
LSYGGFENRKNVISIGGAFSLVEDPSRFKTVHCLLYPETGWCPSKGHH
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtctcctcgatgggtgtcagcaagctctgcttcctgttctccctggctctctgt
gccctgttgctcctcatccccaccctccagccctcacagcatcagggggacctgccccag
ccccgggcccacaacaagcctgcccggcaccctggacatctggtggttcctctccaggca
gatatggggaaagtgacagtggggcgtaatgggattgatggtgactctatggggcggagc
acaccaagagagaccaagaggactgtggatggggactgggtgtatacagctcgtcgagct
gacacccagggcactgggaagcatacagactctcagacagggtcagagggggacttcctc
cacagagctgggggtgtgacgggggctggagggtctcggcccaggaaccctctggagctg
aaagacatttttatagcggtgaagaccaccaggaagtaccacaagtccagattggatctg
ctgttccagacctgggtgtccaaagccaaagaacagacctttatattcacagatggggag
gatcaggagctgaggaggagagcaggggctaacgtcatcaacaccaactgttcagcagca
cacacgcggcaggccctgtgctgtaagatgtctgtggaatacgacaagttcatcgagtca
cagaggaagtggttctgccatatggatgatgataactatgtgattgtacccagtctgctg
aagctgctgtcctcctaccaccacacgcaggatgtttacctgggccggcccagcctcgac
caccccatagaggccgcagagagggtcaagagtgacggatctgtgtcagtgaagttctgg
tttgctacaggaggagcagggttctgtatcagtcgtggtctggccctcaagatgagtcca
tgggctagtctgggcaacttcatcagcacggcggagaagatccgtctccctgacgactgc
accatgggttacatcatcgaggcgctgctggaggtgacactgacacacacacacctcttc
cactcccacctggagaacctgcagaggcttcccacagacaccgtgctggagcaggtcact
ttgagctacgggggttttgagaacaggaagaatgtgatcagcattggaggagccttctct
ctggtggaggacccctcacgatttaagactgtccactgcctcctctacccagagactggc
tggtgtcctagtaagggtcaccattga
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