Salvelinus namaycush (lake trout): 120046992
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Entry
120046992 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: vascular endothelial growth factor receptor kdr-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
snh04510
Focal adhesion
snh04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120046992
04020 Calcium signaling pathway
120046992
09133 Signaling molecules and interaction
04518 Integrin signaling
120046992
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120046992
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120046992
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120046992
Protein kinases [BR:
snh01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
120046992
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_VEGFR-1-like_5th
Ig_3
I-set
VEGFR1-3_N_Ig-like
Pkinase
Ig_2
ig
VEGFR-2_TMD
V-set
VEGFR-1-like_Ig-like
Ig_PDGFR_d4
Ig_4
F22D3_4_N
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
120046992
NCBI-ProteinID:
XP_038848468
UniProt:
A0A8U0QSH5
LinkDB
All DBs
Position
5:complement(26882838..26948313)
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AA seq
1297 aa
AA seq
DB search
MANGSDRERSSKFKGSSSLTNGQVSLPAPLLLPSGDTHLRHTGKSLTLTCRGAAQLHWRL
PWRDVTSEGVRVEECEPRVHAHCSKLLVSHLSPNDTGLYSCRYTQPSADFSSTYIYVKDH
QHPFVEHHFPIPDTLFTYRHEATLVIPCRTTSPDQIVTLEGLPPLSEEIEQWKEWDPKIG
FVIPYGPYESFRLLTCVTSVNGQQVQSQYIPLRQTNFLRNVKINPERIKLLVGDTLVLNC
SAETTFNGRINFQWEYPKRMVNRNPTVNKIRENPALITRMYKAITLSNITMDDRGMYRCT
AEIGNAEMGKKEQASAKVTIYEHPYLNVSYKNEWARRVVYTEGRNKLMFEPKVNALPPTD
TITWYKDGVPINENSTCYESSGYNLLIKDVKQKDAGVFTIALGNKERGLYRNLSYTLVVR
VRPMISEEEVASVDVQPYMFGKQHQLTCTAFGVPMPDITWLWQPCHPDPTDKECTLYTEP
IPVQTDDKGNYSHNWIESINNQTELVKGKNKTVSTLVVGAANVTGIYSCAAQNKLGTRTL
RTPFYVDDHPQHLAIEPQTAIEGDNVTLTCRGTRYLYTDLQWKDPQNSTITNNITALQFS
PYSISLSLSLHNVSRNHTAGYQCWAHKIHNKRVIVKTVLTVHERKRPWLRQNLTNQDINS
SSTLTMACYALGVPPPYITWYKDNLPVQEGPGITLREDGVLTIKRVKKDDEGVYECLASN
GEGSVKASAVVTVMGDEGKPNIEVIVLVCTGAAATFLWLMLILFIRKLRKSVDYKMGPSI
IIDPDEFPLDEQCELLQYDSSKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKLSTCKT
VAVKMLKGGATSNERKALMSELKILIHIGHHLNVVNLLGACTKPGGPLMMIVEYCKYGNL
SNYLRSKRADFIVYKSQDGKLVTSGSGCDLSELIKRRLESVASTGSSASSGFVEDKSYCD
SEEEEEEPEDLYKRVLTMEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKI
CDFGLARDIYKDPDYIRKGDSRLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGAS
PYPGLHIDEEFCCRLKEGTRMRAPEYSSSEIYQTMLDCWQGESGDRPTFTELVERLGDLL
QASVQQEGKHYIPIAALLSKEGDPSNTARSEETNTRPLSHRDSGSTWNIRPGSVKTFDEV
TMENSSNDNHEGGQSDSGMGLSSDDGNTLKRLESFAXPLCIMALAMERXGKQKESVLTEE
KKDKYPQPVPSLDFILNNSSLEPGLECHSPQPSTPPV
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgggagtgatagggagaggtcatctaagttcaaagggagctcatccctcacc
aacggtcaggtcagcctgccggcccctcttctgcttccctctggggacacacaccttcgc
cacactgggaagtcactcaccctcacctgcagaggtgccgcccaactgcactggaggctg
ccctggcgggacgtcacctcggagggggtgcgcgtggaggagtgtgagcctcgggtgcac
gcccactgcagtaagttgctggtgagccacctgagccccaacgacacgggcctctacagc
tgcaggtacacccagccctccgccgacttcagctccacctacatctacgtcaaagatcac
cagcatccgtttgtggagcaccatttccccattccagacaccttgtttacatacagacat
gaggccaccctagtgattccctgtagaacaacttctcctgaccagattgtcactcttgaa
gggctgccacccttatcagaggagatagaacaatggaaggaatgggaccccaaaataggc
tttgtgatcccatatggtccctacgaatcctttcgtctcctgacctgtgtcaccagcgtc
aatggccaacaggtccagtcgcagtacatccctctgaggcaaactaacttcctgaggaac
gtaaagatcaaccctgaacgtatcaagctgttagtgggagatactctggtcctcaactgc
tctgcagagaccaccttcaacggaaggatcaacttccaatgggaatacccaaagaggatg
gtcaatcggaaccccaccgtcaataagatcagagagaatccggctttgatcaccaggatg
tacaaagccatcaccttgtccaacatcaccatggacgacaggggcatgtacaggtgcacg
gcggagatagggaacgctgagatgggaaaaaaggaacaagcctcagccaaggtcaccatc
tacgaacatccatacctgaatgtgtcctataagaatgaatgggccaggagagtagtctac
acagagggtagaaacaagctgatgtttgaacccaaggtcaatgcactgccaccaaccgac
accatcacatggtataaggatggcgtccccatcaacgagaactccacttgttacgagtct
tcaggctacaacctactcatcaaggacgtgaagcagaaggatgccggggtcttcaccatc
gccctgggcaacaaggagagaggcctctacaggaatctcagctacactctggtagtccga
gtgaggcctatgatctcagaagaggaggtggcctcggtggacgtccaaccatacatgttc
ggcaagcagcaccagctaacctgcaccgcctttggagtgcccatgcccgacatcacgtgg
ctctggcaaccatgccatcctgacccaaccgacaaagagtgcaccctttacactgagcca
atcccagttcaaacggatgataaagggaactactcacacaactggattgagagcataaac
aaccaaactgaactggtgaaaggaaagaacaagactgtgagtacgctagtggtgggagcg
gctaacgtcacagggatctactcctgcgcagcccagaacaaacttggcacccgtacactg
agaacccccttctatgtggacgatcaccctcagcacctggccattgagccccagactgcc
atcgagggtgacaacgtcactctgacctgcagggggactcggtacctgtacacagacctg
cagtggaaggaccctcagaactccaccatcactaacaacatcacggccctgcagttcagc
ccatactctatctctctctccctaagcctgcacaatgtgtccaggaatcacacagcaggc
taccagtgctgggcacacaagatccacaacaagagagttatagtcaagactgtgctgact
gtgcatgagaggaagaggccgtggctgagacagaacctgaccaatcaagatataaacagc
agcagcactctgactatggcctgctacgccctgggtgtgcccccaccctacatcacctgg
tacaaagacaacctaccagtacaggagggtccaggtattaccctgagggaggatggggtg
ctgacgatcaagagagtgaagaaagacgatgagggcgtgtacgagtgtctggccagcaac
ggtgaggggagtgtgaaagccagtgctgtggtcactgtcatgggtgatgaggggaagccc
aacattgaggtgatcgtcctggtgtgtacaggagctgctgccaccttcctctggctcatg
ctcatcctcttcatccgcaagctgaggaagtctgtggactataagatgggtccatccatc
atcatcgacccagacgagtttcctctggatgagcagtgtgaactcctgcagtatgacagc
agcaagtgggagtttccccgagaccgcctcagactgggcaaaactctgggccatggagcc
ttcgggaaagtggtggaggcttctgcttttgggatcgacaagctctcgacctgcaagact
gtggctgtcaaaatgctgaaaggaggagctacgtcaaatgagcgcaaggctctgatgtcc
gagctgaagatcctgatccacattggtcatcatctgaacgtggtcaacctgctgggagcc
tgcaccaagcctggaggtccgttgatgatgatagtggagtactgcaaatatggaaacttg
tcaaactacttgagaagcaagagggctgatttcatcgtctataagagccaggacggtaag
ctggtgacgtcggggtcgggctgtgacctcagcgagctcatcaagcggcgcctggagagc
gtggcaagcaccggaagctcggccagctccggctttgtggaagataagagctactgcgac
tcagaggaagaggaggaagagccagaggatctgtacaagagagtattgacaatggaagat
ttgatttgctacagtttccaagttgcaaaaggcatggagttcctggcttcacgcaagtgt
attcatcgtgacctggctgcaagaaacatcttactgtcggagaataatgttgtgaagatt
tgcgattttggactggccagagacatctacaaagacccagactacattcgcaaaggagat
tccagactgcccctcaagtggatggcgccagaggccatttttgacaagatctacaccact
cagagcgatgtgtggtcctttggagtcctaatgtgggagattttctctctgggtgcctct
ccatatcctggcttacacatcgacgaggagttctgctgccgactgaaggaagggaccagg
atgagagctccggaatactcctcctctgagatataccagaccatgttggactgctggcag
ggcgagtcaggagaccgaccaaccttcactgagctggtggagagactaggagacctacta
caggccagtgtacagcaggagggcaagcattacatccctatagcagccctgctgtccaag
gagggagacccctccaacacggcccggtcagaggagaccaacaccaggccgctctctcac
cgcgactcagggagcacctggaacatccggcctggaagtgtgaagacctttgacgaggtt
accatggagaacagttctaacgacaaccatgaggggggacagtcggacagtgggatgggc
ctgtcgtctgacgatgggaacacgctgaagcgcctggagtcttttgcctgacctctctgc
atcatggccctggcgatggagagataggggaaacagaaagagtcggtgctgactgaggaa
aagaaggacaagtaccctcagcctgtcccctctctggacttcatcctgaacaactcttcc
ctggagcccggtctggagtgccacagcccgcagccctccaccccacctgtgtag
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integrated database retrieval system
