Salvelinus namaycush (lake trout): 120047979
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Entry
120047979 CDS
T07522
Symbol
nod2
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2 isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120047979 (nod2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
snh04054
]
120047979 (nod2)
Pattern recognition receptors [BR:
snh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
120047979 (nod2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
WHD_NOD2
AAA_16
nSTAND_NTPase5
AAA_29
AAA_22
AAA_30
T2SSE
Viral_helicase1
Sigma54_activat
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
120047979
NCBI-ProteinID:
XP_038849551
UniProt:
A0A8U0QS34
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All DBs
Position
Sna1:complement(69653167..69662859)
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AA seq
1030 aa
AA seq
DB search
MSINYNPHNKSHFLLLQDYFPAVANWLKLRSYICMSARQLVLRQRAELLGALCCGGSSEG
LESVLDLLLSWGMLFWEDYQNVRVPGRALCANTRVLLDLVYTKGDETCQLLLAAFKQVLP
EAQRAGLSFGNCRTADLENTRDDTKELHGTAIQTLQTDRPGLVRRLKDHIEGALEVLLHT
GSFTPSDCDEVQLLVYTPSQQARRLLDQVRSKGEPAAKVLLQYFQQTEDHPSPFNQEAPP
KECLSYQKKLRSTVSAQSHFLSTYGGTSSLSLEDIYTEGQLELAQGGSEAQPQTGALGLE
DVVGLVGTLNQEADTVLVSGEAGSGKSTLLQRLHLLWARGAALHDFFLLFPFSCRRLSSE
QRELSLRELLFLHCCWPDGDQDRIFQFILDHPHLILFTFDGLDEFMQSFSDSEQRHCCPT
QCAPVPTLLFNLLQGSLMKGVRKVVTSRPEAVGPTLKRYLRKEVLLKGFSPGGIDCFVRK
YLRDPTVATRVLESLRNNTALLGLCHIPVFCWIVSKCYKELLGCGEGEGSPQTITDVYLM
ILQHFFQRRASQRNTMGIGWVQEHQDTALHLGQLAMEGLGASCYVFTGTELQKCGVTEED
ICMGFLIRSEDLSSSTNCKHYEFLHITMQCFFAALYIVLNNNLDRSTIPKLFQPQDRQQQ
PGFHRVCLGHCLTQQEGALKEANTAAETPNLQITATFVSGLLSQRHRSLLLLSCPGPTLD
RKSKQVVTCLSKGIQKHFKSIPRPVEGEKKSMHAMPGFVWLIKCIHEMQDSRIARDTMAK
LEVEHLKLTYCNIGPVECTALAYVLQHLRNPVGLQLDYNYVGDVGVEQLLPCLHVCHSVY
LRHNNISDEGIRKLIEKGIQCERFQKIALFNNKLTDACTECFAHLLKTKQNFLSLRLGNN
NITAAGAGQLAEGLRFNRSLQFLGLWGNKIGDKGAEAIANALKDSQTLVWLSLVDNGVGS
AGACALAPLIKNSTLEELWLTKNCITRTGVECLILALEGNTSVKAVWLRGNELSPEEVEE
MTQREPRLTF
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtccattaattataatccacataataaatcacatttcctgttgctgcaagattatttt
cctgctgtagcaaactggctcaaattaagatcctacatctgtatgagtgcccggcagctg
gtcctgaggcagagagcagagctgctgggtgccctgtgctgtggtggctcttctgagggt
ctggagagtgtattggacctactcctgtcctggggaatgctgttctgggaggactaccag
aatgtacgggtaccaggccgtgctctgtgtgccaacacaagggtgctactagatcttgtg
tacaccaagggagatgagacctgtcaactgctcctggctgctttcaaacaggtcctccct
gaggcccaaagagctggcctctcttttggaaactgtcgtactgccgatctagaaaataca
agagatgatacaaaagaactacatggtacagctatccagaccctccagacagacaggcct
ggtctggtgaggaggctaaaggaccatattgaaggagctctggaggtcctgctgcataca
ggcagctttacaccatctgattgcgatgaagtgcagctacttgtgtacaccccctcacaa
caggcaaggcgtctactggaccaggtcagatcaaagggggagcctgcagcaaaggtccta
ctgcaatactttcagcaaacagaggaccatccctcaccatttaaccaagaggctcctccc
aaagagtgcttgtcctatcagaagaagctgcgcagcactgtgtcggcccagtcacatttc
ctcagcacgtatggaggaaccagcagtctgtctctagaagacatctacacagagggtcag
ctggagcttgcccagggtggcagtgaggcccagccccagactggtgctctggggctggag
gacgtggtgggcctggtgggcaccctgaaccaggaggctgacactgtgctagtctctggg
gaggcaggcagtgggaagagcacccttctccagaggctgcacctcctctgggccaggggg
gcggctctacatgatttcttcctcctctttcccttcagctgccgcaggctgagctcggag
cagagggagctgtctctcagagagctgctgttcctgcactgctgctggccggacggggac
caggaccgaatcttccagttcatcctggaccatccgcacctcatcctcttcaccttcgac
ggcctggacgagtttatgcagagcttctcagactcagagcagaggcactgctgccccacc
cagtgtgccccagtccccaccctgctcttcaacttgctgcagggatccctcatgaagggg
gtgaggaaggtggtgaccagccggccagaggcagtgggtcccaccctgaagcggtacctt
cgcaaggaagtcctcttgaaaggcttctcgcccggcgggatcgactgcttcgtgaggaag
tatcttcgcgacccgacggtggccaccagggtcctggagtctctacgaaacaacacagct
ctactgggcctgtgtcacatcccggttttctgctggattgtgtccaagtgttataaggag
ctgctgggctgtggagagggagagggcagtccccagaccatcacagatgtttacctcatg
atcctgcagcacttcttccagcgccgggcctctcagaggaacaccatggggatagggtgg
gtgcaggagcaccaggatactgccttgcatctggggcagctagccatggagggcctgggg
gcctcttgttatgtcttcacaggcacagagctacagaagtgtggggtgaccgaggaagat
atctgcatggggttcctcatccgtagtgaagacctctcctcctctactaactgcaaacac
tacgagttcctgcacattaccatgcagtgcttctttgctgctctctacattgtcctgaac
aataacttggaccgctccaccatccctaagctctttcagccgcaggacaggcagcaacag
cctggctttcacagggtgtgtctggggcactgcttgacccaacaagaaggggccttgaag
gaggccaatacggcagcagagacccccaacctccagataacagccacttttgtgtctggg
ctcttgtctcagcgccaccgcagcctgctgctcctctcctgccctgggcccactctggac
aggaagtccaagcaggtggtgacgtgcctgtccaaaggcatacagaagcactttaaatcc
atccctcggcctgtggagggggagaagaagagcatgcacgccatgccgggcttcgtgtgg
ctaatcaagtgcatccatgagatgcaggacagcaggatcgccagagacactatggctaag
ctagaggtggaacacctgaagctgacctattgtaacataggccctgtggagtgtactgcg
ctggcctacgtgctccagcaccttaggaaccctgtggggcttcagctagactacaactac
gtaggagacgttggggtggagcagctgctgccttgcctgcatgtctgccactctgtatac
ctgagacacaataacatatcagatgagggaatccgtaaattgattgaaaaaggcatccag
tgtgagcgctttcagaagattgcgctcttcaacaacaagctaactgatgcctgcacagag
tgcttcgctcacctcctgaagacgaaacagaattttctctctctaaggctgggaaacaat
aacatcacagcagcaggggcagggcaactggcggagggactgaggttcaatcggtcacta
cagttcttggggctttggggaaataaaataggtgataaaggtgcagaggccattgccaat
gctctaaaggacagccaaaccttggtgtggctcagcctggtagacaatggtgttggcagt
gcaggagcatgtgctcttgccccactcatcaagaacagtacgcttgaggagctgtggtta
accaaaaactgcatcacaagaacaggtgtggagtgtctaatactggctcttgaaggcaac
actagtgtgaaggcagtgtggttgagaggtaatgagctcagcccagaagaggtggaggag
atgacacagcgggaacccaggcttacattctga
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