Salvelinus namaycush (lake trout): 120048046
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Entry
120048046 CDS
T07522
Name
(RefSeq) sequestosome-1-like isoform X1
KO
K14381
sequestosome 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04137
Mitophagy - animal
snh04140
Autophagy - animal
snh04217
Necroptosis
snh04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120048046
04137 Mitophagy - animal
120048046
09143 Cell growth and death
04217 Necroptosis
120048046
04218 Cellular senescence
120048046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120048046
03029 Mitochondrial biogenesis [BR:
snh03029
]
120048046
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120048046
Membrane trafficking [BR:
snh04131
]
Autophagy
Mitophagy
Cargo receptors
120048046
Pexophagy
120048046
Aggrephagy
120048046
Xenophagy
120048046
ER-phagy
ER-phagy recepters
120048046
Other autophagy associated proteins
Midbophagy
120048046
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
120048046
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120048046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
ZZ
PB1
Motif
Other DBs
NCBI-GeneID:
120048046
NCBI-ProteinID:
XP_038849654
UniProt:
A0A8U0UDI9
LinkDB
All DBs
Position
Sna5:complement(21649589..21653671)
Genome browser
AA seq
483 aa
AA seq
DB search
MSMTVKAYLLGKEDAPKEIRRIAVDQDVSTSFEYLKKKVEDVFSTLRNVTYQMYYKDEDG
DMIAFSTDDELIMGLTCIKDYTFRLFIKEKKEHRREFPAFAFPGGVPPFAFPPPPGTPHM
GPPPPHGHHGHGHHGHGPPMVHPNVTCDECEGSVAGTRFKCTVCPDYDLCSTCQAKGLHK
EHVLLPIWHPFNNAFEEQKGAYVWLGRNGLYSCCSSTQWFPRGKWMRKMRHCTWGQAQNQ
TQPGPSGSQPSQAAAGDRQPSDASSAASQQSQANMDYLKNIGEGVAAMLSPLGIDVDIDV
ELEAKRTKVMTPNLTPPGSGGPPSARSNNGTGGSKGDGTKDGDMEVDGLSSLGSASDLAT
GGKDAGGSGDDEWTHLTSKEVDPSTGELQSLRVGEEGSLEAPGSPTVPQGPSQEPQKSLT
LAEAAAYPHLPQDADPRLVESLSQMLAMGFTDEGGWLTRLLHTKDCDVGAALDTIHYSKP
AKK
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgaccgtcaaagcctatctccttgggaaggaggacgcgccgaaagaaattcgt
cgcattgctgtcgaccaagatgtttcaacgagttttgagtatctgaaaaaaaaggttgag
gatgttttctcaaccctgcgaaatgtcacctaccaaatgtattacaaagatgaagacggt
gacatgatcgccttctccactgatgatgagctcatcatgggcctcacctgcatcaaggac
tacaccttccgcctcttcatcaaggagaagaaggagcataggcgtgaattccctgctttt
gccttccccggtggtgtcccccctttcgccttcccccctccccctggaacacctcatatg
ggacctcccccaccccacggccaccatggtcatggccaccacggtcacgggccccccatg
gtgcaccccaatgtgacctgtgacgaatgtgagggctcagtggcggggacccgcttcaag
tgcaccgtgtgccctgactatgacctgtgctccacgtgccaagccaaggggcttcacaag
gagcacgtcctcctgcccatctggcaccccttcaacaacgcatttgaggaacaaaagggg
gcgtatgtgtggttagggagaaatggcctctatagttgttgttcttctactcagtggttc
cctcgtgggaagtggatgaggaagatgagacactgcacgtggggtcaggcccaaaaccag
acccagcctggtccctctgggtcccagccaagccaggcagccgcaggggacagacagccc
tctgatgcctcatctgctgcctcccagcagtcccaagccaatatggattacctgaagaac
attggagaaggggtggcagccatgcttagcccactgggtatcgatgtggatattgatgtg
gagttggaggcaaagaggaccaaggtgatgacccccaatctgaccccacctgggtcagga
ggcccccccagtgctaggagcaataacgggacgggggggtccaagggagatgggactaaa
gacggggacatggaggtggacgggcttagcagcctaggaagcgcgagtgatttagctacg
ggtggtaaagatgcagggggcagtggtgacgatgagtggacccacctgacctccaaggag
gtggatccctctacaggggagctccagtctctcagggtaggcgaggagggctctctggaa
gccccagggtcccctactgtcccccagggtccctcacaggaaccacagaagtccctcact
ctcgctgaggccgcagcctacccccaccttcctcaagatgccgacccacgcctggtggag
tccctgtcccagatgctggccatgggcttcacagatgaggggggctggctcacccgcctc
ctccacactaaggactgtgacgtcggggccgccctggacaccatccactactccaaaccc
gccaagaagtaa
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integrated database retrieval system