Salvelinus namaycush (lake trout): 120048073
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Entry
120048073 CDS
T07522
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00052
Galactose metabolism
snh00510
N-Glycan biosynthesis
snh00513
Various types of N-glycan biosynthesis
snh00514
Other types of O-glycan biosynthesis
snh00515
Mannose type O-glycan biosynthesis
snh00533
Glycosaminoglycan biosynthesis - keratan sulfate
snh00601
Glycosphingolipid biosynthesis - lacto and neolacto series
snh01100
Metabolic pathways
Module
snh_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
snh_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120048073
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120048073
00513 Various types of N-glycan biosynthesis
120048073
00515 Mannose type O-glycan biosynthesis
120048073
00514 Other types of O-glycan biosynthesis
120048073
00533 Glycosaminoglycan biosynthesis - keratan sulfate
120048073
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
120048073
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120048073
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120048073
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120048073
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
120048073
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
120048073
2.4.1.90 N-acetyllactosamine synthase
120048073
Glycosyltransferases [BR:
snh01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
120048073
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120048073
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120048073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
tRNA_anti-like
Motif
Other DBs
NCBI-GeneID:
120048073
NCBI-ProteinID:
XP_038849693
UniProt:
A0A8U0UEE7
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All DBs
Position
Sna5:complement(23752446..23770195)
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AA seq
360 aa
AA seq
DB search
MLMMRDSTVNFSVLHRTCKLVVILCFLHISVTLIFYVRSLDIPFSFAQNQQAHTAKKHDQ
TTSKDTKPDVVETNRFSVDNVTSTFTKELVKCLDTSPLLVGPLRIEFSNPVSLDVVRKEN
PNLQNGGRFKPKDCVALQKVAIIIPFRNRDEHLKFWLYYLHPILQRQQLDYGIYVINQDG
DEIFNRAKLLNVGYTEALKEYDYGCFVFSDVDLIPMDDRNTYKCFSQPRHLSVSMDKFGF
RLPYNQYFGGVSSMSKEQFLKINGFPNNYWGWGGEDDDIFNRLSSRGMTISRPSGAVGKC
RMIRHNRDGGNEDNPQRFDRIAHTRETMNKDGIKTLSYKVVKVEKDQLYTKITVDVGKKD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgctaatgatgcgggattcaactgtgaatttcagtgttctccatagaacttgcaaattg
gtcgtcattctttgttttctccatatttcggtcacattaattttttacgtgaggtcgtta
gatattccattttcttttgcacaaaatcagcaagcacacacagcgaaaaagcatgaccaa
actacatcaaaggacaccaaacctgacgtggttgaaacgaatcgcttttctgtagacaac
gtgacatctacattcaccaaagaacttgtaaaatgtcttgacacttcgccactgcttgtg
ggcccactgcgaattgagttctctaacccagtcagccttgatgtggtaaggaaggagaac
cccaatcttcagaatggggggcgcttcaagcccaaagactgtgtggccctccagaaggtg
gctatcatcatccctttccgcaaccgcgacgagcacctcaagttctggctgtactacctc
catcccatccttcagcgccagcagctggactacggcatctacgttatcaaccaggacggt
gatgagatctttaaccgcgccaagctcctcaacgttggctacacagaggccctgaaggag
tacgactatggctgctttgttttcagcgatgtggacctcatccccatggatgaccgcaac
acctacaagtgcttcagccagcccaggcacctgtctgtctccatggacaagtttggcttc
aggttgccgtacaaccagtattttggcggcgtgtcgtcaatgagcaaggagcagttcctc
aagatcaacggcttccccaacaactactggggctggggaggggaggacgacgacattttc
aacaggctgagctccagggggatgaccatctcgcggcccagcggagccgtggggaaatgc
aggatgatccgccacaaccgggacggtgggaacgaagacaaccctcagaggttcgaccgc
atcgcccacaccagggagacgatgaacaaagacggcatcaaaaccctgtcgtacaaagtg
gtcaaagtggagaaggatcaattatacaccaaaattactgtggacgtgggaaaaaaagac
tga
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