Salvelinus namaycush (lake trout): 120048099
Help
Entry
120048099 CDS
T07522
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120048099
Cell adhesion molecules [BR:
snh04515
]
Cadherins
Protocadherins
120048099
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
120048099
NCBI-ProteinID:
XP_038849733
UniProt:
A0A8U0QTF9
LinkDB
All DBs
Position
Sna5:30007968..30010475
Genome browser
AA seq
830 aa
AA seq
DB search
MTKRMGYRDWRWLALWWHNFFLLWSTIDSQTRYTISEELKQGSVVGKLAKDLGLGLSEVF
DRKLRVASEAGKQYFNVDAGKGELVVNERIDRETLCGQSASCVLPLQVVIENPLQLHRIE
VEIRDINDNSPSFLTKELTLKIAESTVAGMHFPLESAEDPDVGSNSLKSYTISKDDCFSL
KVNELRNGRKLPELVIERALDREKKSVHQLLLTALDGGNPVRSGTSQITIIVLDNNDNVP
LFENNVYKVSMNENSPKGTFMVKLKATDNDEGQNGEVKYTFGERTPESVLSTFDINPVTG
EMFLKGELDSESAANYEIDVVAKDEGIPEMEGHCSVQVEVIDLNDNPPEIVLTSKPSPVR
EDAPRGTVVALIGARDRDSGNNGKVTLQLPKGHPFSLKPSFSNNYALVTSGVLDRESFSE
YNIEITATDSGSPPLTTKKTIPVSIIDVNDNPPKFTQPSYNVFLKENGPPGSMLSSVSAS
DLDFGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQILLQAKDH
GSPSLSSNATVHVFILDQNDNAPAVIYPSAALGSLSHQKMPRSAKAGCLVTKVTAVDADS
GHNAWISYRLAEATDTSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIDIQDDGVPVQSATV
TLAILVEDGLHEPISDLRQKAPEPSKKSGRIALYLIISLASVSVLSLVTFIILAVKCVRN
SRSSGSCCMRRDDLDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSGELYHCNDYDS
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagagaatgggataccgagactggagatggctggctctttggtggcataatttc
tttctcttgtggagtacaatagacagccagactcgctacaccatctcggaggaactgaaa
cagggctctgtggtgggaaaactagctaaagatctgggtttgggactctctgaggttttt
gaccgtaagctgcgtgtcgcctctgaggctggtaagcagtatttcaatgtggatgcgggg
aagggcgagctggtcgtgaatgagagaatagacagagagactttatgcggacaaagcgcc
agctgcgttttacctctgcaggttgtcattgaaaacccgttacagttgcaccgtattgag
gtggaaatacgcgacataaatgacaattcacctagtttcttaacaaaggagctcacattg
aaaatagcagaatcgacagttgcgggcatgcattttcctctggagagcgcagaggaccca
gacgttggaagcaattcgctcaagtcctatactattagtaaagatgactgtttcagttta
aaagtaaacgagcttcgtaatggaagaaaactccctgaactggtcatagaaagagcactt
gatagagagaaaaaatctgtccatcagctgctgttaacagcgttagacggagggaatccc
gtcagatccgggacttcacagataactatcatagtgcttgataacaatgacaacgttccc
ctatttgaaaacaatgtatataaagtgtccatgaacgaaaatagtccaaagggtaccttc
atggttaaacttaaagcgacggataacgacgaaggacaaaatggtgaggtaaaatataca
tttggtgagcgtacacccgagtccgtgctttccacatttgatattaatccagttacgggg
gaaatgtttttgaaaggtgaattagattctgaaagcgctgcaaattatgaaattgatgta
gttgctaaagatgaaggtattccggagatggaaggacactgtagcgtgcaggtggaagta
atagacttaaacgacaaccctccagaaattgtcctcacctccaaaccgagcccggtgcgc
gaggacgctcctagaggcacggtagtggctttgatcggtgcccgggaccgagactccggg
aataacggtaaagtaacattacaacttccaaaaggccatcctttcagtctgaaaccgtcc
ttttctaataattacgcactggtcaccagcggtgttttagaccgagagagcttctcagag
tataatattgagataacagccactgattcaggctcccctccactgactaccaagaaaact
ataccggtcagcatcattgatgtcaacgacaacccccctaaattcactcagccttcctac
aatgtatttttaaaagagaatggaccaccaggatccatgttatcatcagtatctgcatct
gacctggatttcggagataatgccaagatttcttactccatcttagactccaaagtgcag
gacgtgtctgtatcctcctatgtgtacattaactctgacaacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattctgttgcaggccaaggaccac
ggctctccctctctgagcagcaacgccacagtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctccgctgccctgggctcgctctctcaccagaagatg
ccccgctccgctaaagcaggctgcctggttactaaggtaacggccgtggacgcagactcg
ggccataacgcctggatctcgtataggctggctgaggccacagacacgtctctgttcagt
gtcaatctttacacgggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagatatacaggacgacggggtgccagtccagtccgccacagtc
acattggccatactggtagaggatgggctccatgaacccatctcggatctccggcagaaa
gcgccagagcctagcaagaaaagcgggagaatcgcgctgtatttgatcatctctctggcc
tcggtgtccgtgctgtctctggtgaccttcatcatcttagcagtcaagtgcgttagaaac
agcaggagcagcggtagttgctgcatgagacgggacgacttggacggctacaagaacccc
aacagaaacctgcagatccagctcaacactgacgggccaattaagtacgtggaggtcctg
ggaggggatatgttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgattttaaggagatgatcaac
gtcctagacgcgtctttacccgacagcgcctggacctttgagagccaacaggtgagcggt
gagctgtaccattgtaatgattatgattcctga
DBGET
integrated database retrieval system