KEGG   Salvelinus namaycush (lake trout): 120048099
Entry
120048099         CDS       T07522                                 
Name
(RefSeq) protocadherin gamma-C5-like
  KO
K16497  protocadherin gamma subfamily C
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:snh04515]
    120048099
Cell adhesion molecules [BR:snh04515]
 Cadherins
  Protocadherins
   120048099
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2
Other DBs
NCBI-GeneID: 120048099
NCBI-ProteinID: XP_038849733
UniProt: A0A8U0QTF9
LinkDB
Position
Sna5:30007968..30010475
AA seq 830 aa
MTKRMGYRDWRWLALWWHNFFLLWSTIDSQTRYTISEELKQGSVVGKLAKDLGLGLSEVF
DRKLRVASEAGKQYFNVDAGKGELVVNERIDRETLCGQSASCVLPLQVVIENPLQLHRIE
VEIRDINDNSPSFLTKELTLKIAESTVAGMHFPLESAEDPDVGSNSLKSYTISKDDCFSL
KVNELRNGRKLPELVIERALDREKKSVHQLLLTALDGGNPVRSGTSQITIIVLDNNDNVP
LFENNVYKVSMNENSPKGTFMVKLKATDNDEGQNGEVKYTFGERTPESVLSTFDINPVTG
EMFLKGELDSESAANYEIDVVAKDEGIPEMEGHCSVQVEVIDLNDNPPEIVLTSKPSPVR
EDAPRGTVVALIGARDRDSGNNGKVTLQLPKGHPFSLKPSFSNNYALVTSGVLDRESFSE
YNIEITATDSGSPPLTTKKTIPVSIIDVNDNPPKFTQPSYNVFLKENGPPGSMLSSVSAS
DLDFGDNAKISYSILDSKVQDVSVSSYVYINSDNGSIYSMHSFDYEKLKVFQILLQAKDH
GSPSLSSNATVHVFILDQNDNAPAVIYPSAALGSLSHQKMPRSAKAGCLVTKVTAVDADS
GHNAWISYRLAEATDTSLFSVNLYTGEVRTKRAVSEQDDSSQRLLIDIQDDGVPVQSATV
TLAILVEDGLHEPISDLRQKAPEPSKKSGRIALYLIISLASVSVLSLVTFIILAVKCVRN
SRSSGSCCMRRDDLDGYKNPNRNLQIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPMSE
FSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSGELYHCNDYDS
NT seq 2493 nt   +upstreamnt  +downstreamnt
atgacaaagagaatgggataccgagactggagatggctggctctttggtggcataatttc
tttctcttgtggagtacaatagacagccagactcgctacaccatctcggaggaactgaaa
cagggctctgtggtgggaaaactagctaaagatctgggtttgggactctctgaggttttt
gaccgtaagctgcgtgtcgcctctgaggctggtaagcagtatttcaatgtggatgcgggg
aagggcgagctggtcgtgaatgagagaatagacagagagactttatgcggacaaagcgcc
agctgcgttttacctctgcaggttgtcattgaaaacccgttacagttgcaccgtattgag
gtggaaatacgcgacataaatgacaattcacctagtttcttaacaaaggagctcacattg
aaaatagcagaatcgacagttgcgggcatgcattttcctctggagagcgcagaggaccca
gacgttggaagcaattcgctcaagtcctatactattagtaaagatgactgtttcagttta
aaagtaaacgagcttcgtaatggaagaaaactccctgaactggtcatagaaagagcactt
gatagagagaaaaaatctgtccatcagctgctgttaacagcgttagacggagggaatccc
gtcagatccgggacttcacagataactatcatagtgcttgataacaatgacaacgttccc
ctatttgaaaacaatgtatataaagtgtccatgaacgaaaatagtccaaagggtaccttc
atggttaaacttaaagcgacggataacgacgaaggacaaaatggtgaggtaaaatataca
tttggtgagcgtacacccgagtccgtgctttccacatttgatattaatccagttacgggg
gaaatgtttttgaaaggtgaattagattctgaaagcgctgcaaattatgaaattgatgta
gttgctaaagatgaaggtattccggagatggaaggacactgtagcgtgcaggtggaagta
atagacttaaacgacaaccctccagaaattgtcctcacctccaaaccgagcccggtgcgc
gaggacgctcctagaggcacggtagtggctttgatcggtgcccgggaccgagactccggg
aataacggtaaagtaacattacaacttccaaaaggccatcctttcagtctgaaaccgtcc
ttttctaataattacgcactggtcaccagcggtgttttagaccgagagagcttctcagag
tataatattgagataacagccactgattcaggctcccctccactgactaccaagaaaact
ataccggtcagcatcattgatgtcaacgacaacccccctaaattcactcagccttcctac
aatgtatttttaaaagagaatggaccaccaggatccatgttatcatcagtatctgcatct
gacctggatttcggagataatgccaagatttcttactccatcttagactccaaagtgcag
gacgtgtctgtatcctcctatgtgtacattaactctgacaacggcagcatctacagcatg
cactcgtttgactatgagaaactgaaggtgtttcagattctgttgcaggccaaggaccac
ggctctccctctctgagcagcaacgccacagtccatgtttttatcctggaccagaacgac
aatgcccccgctgttatttacccctccgctgccctgggctcgctctctcaccagaagatg
ccccgctccgctaaagcaggctgcctggttactaaggtaacggccgtggacgcagactcg
ggccataacgcctggatctcgtataggctggctgaggccacagacacgtctctgttcagt
gtcaatctttacacgggggaggtgaggactaaacgcgctgtgtccgagcaggacgactcc
tctcagaggctgcttatagatatacaggacgacggggtgccagtccagtccgccacagtc
acattggccatactggtagaggatgggctccatgaacccatctcggatctccggcagaaa
gcgccagagcctagcaagaaaagcgggagaatcgcgctgtatttgatcatctctctggcc
tcggtgtccgtgctgtctctggtgaccttcatcatcttagcagtcaagtgcgttagaaac
agcaggagcagcggtagttgctgcatgagacgggacgacttggacggctacaagaacccc
aacagaaacctgcagatccagctcaacactgacgggccaattaagtacgtggaggtcctg
ggaggggatatgttgtctcagagtcagtccttcaggtcctgtctctctcccatgtcagag
ttcagtgatttcaccttcgttaagcccagcagcaccactgattttaaggagatgatcaac
gtcctagacgcgtctttacccgacagcgcctggacctttgagagccaacaggtgagcggt
gagctgtaccattgtaatgattatgattcctga

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