Salvelinus namaycush (lake trout): 120048279
Help
Entry
120048279 CDS
T07522
Symbol
znf407
Name
(RefSeq) zinc finger protein 407 isoform X1
KO
K26729
Zinc finger protein 407
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120048279 (znf407)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120048279 (znf407)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
zf-H2C2_5
zf-C2H2_16
zf-met
zf-C2H2_jaz
zf-C2H2_ZN142
zf-C2H2_15
DUF7963
zf-C2H2_REST
Motif
Other DBs
NCBI-GeneID:
120048279
NCBI-ProteinID:
XP_038850055
UniProt:
A0A8U0UES3
LinkDB
All DBs
Position
5:complement(42650835..42811697)
Genome browser
AA seq
1828 aa
AA seq
DB search
MISEHQELSNMDRELRSGKEINEDKVPHHRDTGSVSTEEMESGGIPSLAKRPRPDDVTAD
STGEIEEDTGGKVADGKESDQPPRVEVNITPETGYGCACPICGFVAKTPTALKIHSKRKH
TGRGKTRGVSSAEVLVEIDGSTTRATAQTSNYKTGGDTEEKVSSSERQQDATESQSQGTE
AGGSEGEVTTIIAKEEIAEKQGTGRDTFDMKVTTIATEEIAEEEQEKTPGKKIVGKRGPK
PKTIHACSYCGHEFRDKPSLDTHIKRRHTKEMNYFCEFCLYACVAKCDYEKHCLSNKHNK
RVAESRESSGLSSPMDKKTAEQAQIFASTTTQTRASRRALGARFQLQCGSCEFRVSNSAL
LESHARLKRHGEHRFLCNVCRYYTATSEWMDTHVSSESHRRVAEEKNTGSSFEECVEKVS
KDSIGDDMLTDDVAVGVIGHDGELQPDVNEEAIEAAKVVLENMEEHTDEKSPLKRRRGRP
KGPAATTCEYCGLLASNSTNLNVHIRRKHSRQYSFTCRLCSYNCVTKGDMDRHCVTKKHL
KRVEDASSDGQVDLDTSVQVVSKESGSQASEGEAIHRNSPVRAGSKREEGATDKTGELSQ
DDVKAQVSSPKKSKYDLVNSCSHCSFVAHSIPSLDLHVKRRHTRDFEFVCLACSYYAVTR
REMSRHASTDKHKQKSEVYLENLESFVAEDLAQPEEEAMELGNRADPDADNNAHTEDPSP
SVPPDTDIEQPTGTTTDQPNIIDTDQPTDTDTDQPTETEQPINTDTDQPPIIDTEQPTDT
GTDQPTETEQPNYTDTDQPHIIDTEQPTDTEQPTDTDQPNDTDTDQPPIINTDQPTETEQ
PNNTDTDQPPIINIEQPTDTDQPTDTDQPNDTDTDQPPIINTEQPTGTDQPTDTDQPNDT
DTDQPPIIDTEQPTDTYTDQPTETEQPNYTDTDQPPIINTEQPTDTYQHTETEQPNNTEH
ITTNPTQTSDVLSNEHAAPIVEVSGTVVEENTEIQVAGEASCGGSEQTSNEAPGTFEPQE
APAEITITPPEEGQKEGAEPEAEPELFCSDDDIEMADEKPDISSPEKQLTRALPFDACII
PLKSLTEAELALHEERMAHSVEGHSGLAGPGSFQKIKRTKPVGASGLSKGLTPNPRIRCE
DCGFVADGMSGLNVHISMKHPSKEKHFHCMLCGKSFYTESNLHQHLTSAAHLRNEQASIE
ELPEGGATFKCVKCTDPFETEQELFVHIKEKHEELLREVNKYVLEDTEQINREREENQGS
VCKHCGKVCKSSNSMAFLAHIRTHTGSKPFKCKICNFATAQLGDARNHVKRHLGMREYKC
HICGWAFVMKKHLSTHLLGKHGLGQPKERKFECDLCDRSFSEKWALNNHMKLHTGDKPHK
CAWPACHYAFLTLSAMKDHYRTHTGEKSFLCDLCGFAGGTRHALTKHRRQHTGERPFKCQ
LCGFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCAENIRKHILHTGKHEGVKMYNCPK
CDYGTNGPMDFRNHLKEHHPDIENPDLAYLHAGIVSKSFECRLKGQGATFVEVDTAFDGA
FPVRRVGSMEGLEGQEGVQQVIIIQGYGDGEMAFDQALEESAAATLRDLAMAGQVAEVLH
ITEDGQVISSGREVSAGGAHHLAGGTTQYVLLESGGSAAGGHGGRAMHHHMVSESSTALD
ALLSAVSEMGQQEEDSQEVMTQEVVSEVMERVEEEEMEVEVKTEEEVCEEQQVQEEQVVQ
EVLQFAASQLMMKEGLTQVIVNNEGTHYIVTELDDNTLQVEGTMYTQHQGGEDDQQSEGV
SEGQAGERMVYYLDGATHNVVLEKVEVD
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgagcatcaggagttgtctaacatggacagagaattaaggtcagggaaggag
attaatgaggacaaggtgcctcatcatagggacacaggaagtgtctctacagaggaaatg
gagagtggaggaattccttccctagcaaagaggcccaggcctgatgatgtcacagctgac
agcacaggagagattgaggaggacaccggcggtaaggtggctgatgggaaggagtcagac
cagccccctcgggttgaggtgaacattaccccggagacaggttacggctgtgcctgtccc
atctgtggctttgtggccaaaactccaactgccttgaagattcactccaagaggaagcac
accggtagaggaaagacccggggtgtgagctcagctgaggtacttgttgaaatagatggc
tccacaaccagagcaacagcacagacttcaaattacaagacaggtggagacactgaggag
aaagtgagcagcagtgagagacagcaggatgccacagagagtcagagtcagggcacagag
gcagggggttctgagggggaggtgactacaataatagccaaagaggaaattgctgagaaa
caagggacagggagagatacttttgatatgaaggtgactacaatagctacagaggagatt
gcagaggaggagcaagaaaagacccccggtaagaagatagtaggtaaacggggccccaag
cccaagaccatacatgcttgtagctactgtggtcacgagtttagggacaagccaagccta
gatacacacatcaagagacgccacaccaaagagatgaattacttctgtgaattctgcttg
tacgcctgtgtggcaaagtgcgactacgaaaagcactgtcttagtaacaagcacaacaaa
cgagtcgcggaaagcagggaatcctctggcctctcgtcacccatggacaagaagacagcc
gagcaagctcaaatctttgcctccacgacgactcagacccgggcgtccaggcgtgcgctc
ggtgccaggttccagctgcagtgcgggagttgcgaattcagggtcagcaactctgctttg
ctggagagccacgctcggctaaagcgccatggcgagcatcgcttcctctgtaacgtctgc
cgctactacaccgctacatccgagtggatggacacacatgtgtcctcggagagccaccgg
cgtgtggctgaggagaaaaacacagggtcctcctttgaggagtgcgttgagaaggtgagc
aaagattcgatcggtgacgacatgctgacagatgacgtggcagtaggggtcatcggacat
gatggagagctgcaacctgatgttaatgaggaagctattgaggctgcgaaagtcgtgttg
gagaacatggaagagcacacggacgagaaaagccccctcaagaggaggagaggcaggcca
aaggggcctgctgcaactacatgtgaatactgtggccttctcgcctccaatagtaccaat
ctaaatgtgcatattcgtcgtaagcacagccggcagtacagcttcacctgcaggctttgt
tcttacaactgtgtgacgaaaggcgacatggaccgacactgtgtcacaaagaagcacctt
aaacgcgtggaggatgctagcagcgatggccaagtggacctggatacatcagtgcaggtc
gtgagtaaagagtcaggctctcaggccagcgagggtgaggctatacatcggaatagtcca
gtcagagcagggtccaaaagagaggagggggccacggacaaaacaggggagctgtcacaa
gacgacgtcaaagcacaagtgagcagcccgaaaaagagcaagtacgacttggtcaactcc
tgcagccattgcagcttcgtagctcattcgattccctccctcgacctccacgtgaagagg
agacacacccgggactttgagtttgtgtgcctggcgtgcagctactacgcggtcacgcgt
cgagagatgtctcgccacgcctccacggacaagcataagcagaagagtgaggtctaccta
gagaacctggagagctttgtggcggaagacctggcacagccagaggaggaggctatggag
ctggggaacagagctgaccctgatgcagacaacaatgctcacactgaggatccctccccc
tcagtgccccctgacacagacatagagcagcccacaggcacaactacagaccagcctaac
attatagacacagaccaacccacagacacagatacagatcaacccacagagacagagcag
cccatcaacacagacacagaccagccccctatcatcgatacagaacaacccacagacaca
ggtacagaccaacccacagagacagagcagcccaactacacagacacagaccagccccat
atcatcgatacagaacaacccacagatacagaacaacccacagatacagaccagcccaat
gacacagacacagaccagccccctatcatcaatacagaccaacccacagagacagagcag
cccaacaacacagacacagaccagccccctatcatcaatatagaacaacctacagataca
gaccaacccacagacacagaccagcccaatgacacagacacagaccagccccctatcatc
aatacagaacaacccacaggtacagaccaacccacagacacagaccagcccaatgacaca
gacacagaccagccccctatcatcgatacagaacaacccacagacacatatacagatcaa
cccacagagacagagcagcccaactacacagacacagaccagccccctatcatcaataca
gaacaacccacagatacataccaacacacagagacagaacagcccaacaacacagagcat
attaccactaaccccacacagacttctgacgttttgagcaatgagcatgcagccccaata
gtggaagttagtggcactgttgttgaggaaaacacagagatccaggtggctggtgaggcg
tcctgtggtggctcggaacaaaccagcaacgaagctccaggtacgtttgagcctcaggag
gcaccagcagaaatcaccattacaccgcccgaggaaggccagaaggaaggggccgagccc
gaggcggaaccagagctattctgttcagacgacgacattgagatggctgatgagaaacct
gacatctcttccccagagaaacagctcaccagggcgctgccgttcgacgcttgcatcata
cctctcaagtccttgactgaagccgagctggctttgcatgaagaacgcatggctcactct
gttgagggccactctggcctagccggaccgggcagtttccagaagatcaaaagaaccaaa
cctgtaggggcttcaggtctgtccaaggggttaactcccaacccccgcatccgctgcgag
gactgcggcttcgtggcggacggcatgagcggcctcaatgtgcacatctccatgaagcac
ccgtccaaggagaagcacttccactgcatgctgtgcggcaagtccttctacacggagagc
aacctgcaccagcacctgaccagcgccgcccacctgcgcaacgagcaggccagcatcgag
gagcttccggaaggcggcgccaccttcaagtgcgtgaagtgcacggacccgttcgagacg
gagcaggagctgttcgtgcacatcaaggagaagcacgaggagctgttgcgcgaggtcaac
aagtacgtcctggaggacacggagcagatcaaccgcgagcgcgaggagaaccagggcagc
gtgtgcaagcactgcggcaaggtgtgcaagagcagcaactccatggccttcctggcgcac
atccgcacacacacgggatcgaagccattcaagtgcaaaatctgcaactttgccaccgcc
cagctgggtgacgccaggaaccacgtgaagagacatctgggcatgagagagtacaagtgc
cacatctgtgggtgggcctttgtgatgaagaagcacctgagcactcacctgttggggaaa
catggactgggccagcccaaagagaggaagtttgagtgtgatctgtgcgaccggtcgttc
agtgagaagtgggctctgaacaaccacatgaagctgcatacgggggacaagccccataag
tgtgcctggcctgcctgccactacgccttcctcaccctgtctgccatgaaagaccactac
aggacccacacaggagagaagtccttcctgtgtgatctctgtggttttgcgggtggcacg
cgacatgccctcaccaaacatcgccgccaacacacaggagaacggcccttcaagtgtcag
ctgtgcggcttcgcctccaccacccagtcccacttgacccgccacaagcgggtgcacaca
ggggagaagccctaccgatgcccctggtgcgactacagatccaactgtgcggagaacatc
cgaaagcacatcctgcacacggggaagcacgagggagtgaagatgtacaactgccccaag
tgtgactacggcaccaacggccccatggacttcaggaaccatctgaaggagcatcacccc
gacatcgagaaccctgacctggcctacctgcatgcaggtatcgtgtccaagtcgttcgag
tgtcgtctaaagggccagggagccacattcgtggaggttgacacagcgtttgacggggcc
ttcccggtgcggagggtgggctccatggaggggctggagggccaggagggtgtccagcag
gtgattatcatccagggctacggcgatggggagatggccttcgaccaggccctggaagag
tcagccgctgccaccctgcgggacctggccatggcgggccaggtggccgaggtgctccac
atcaccgaggatggccaggtcatctcctcagggagggaggtgtctgcaggcggggcacat
cacctggccggaggcaccacccagtacgtcctgctggagtccggcgggtctgcagccgga
ggtcatgggggaagggcgatgcaccaccacatggtgtcggagtcatccacggctctggat
gccctcctcagtgccgtcagcgagatgggccagcaggaagaagacagccaagaggtcatg
acccaggaagttgtgtcagaggtcatggagcgagtggaggaggaggagatggaggtggag
gtgaagacggaggaggaggtgtgcgaggagcagcaggtgcaggaggagcaggtggtccag
gaggtgctgcagtttgcagccagccagctgatgatgaaggaggggctgacccaggtgatc
gtcaacaatgaggggacccactacatcgtgacggagctggatgacaacaccctccaggtg
gaggggaccatgtacacccagcaccagggaggggaggacgaccagcagagcgagggagtt
tcagagggccaggctggggagaggatggtctactacctggatggagctacacacaacgtg
gttctggagaaggtggaggtggactag
DBGET
integrated database retrieval system
