Salvelinus namaycush (lake trout): 120048414
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Entry
120048414 CDS
T07522
Name
(RefSeq) toll-like receptor 2 type-2
KO
K10159
toll-like receptor 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04620
Toll-like receptor signaling pathway
snh05132
Salmonella infection
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120048414
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120048414
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120048414
09171 Infectious disease: bacterial
05132 Salmonella infection
120048414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120048414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120048414
04054 Pattern recognition receptors [BR:
snh04054
]
120048414
04090 CD molecules [BR:
snh04090
]
120048414
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120048414
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Toll-like receptors
120048414
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120048414
Pattern recognition receptors [BR:
snh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
120048414
CD molecules [BR:
snh04090
]
Proteins
120048414
Glycosaminoglycan binding proteins [BR:
snh00536
]
Hyaluronan
Cell surface receptors
120048414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_5
LRR_9
LRR_NXF1-5
ThsB_TIR
RE_XcyI
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120048414
NCBI-ProteinID:
XP_038850297
UniProt:
A0A8U0QX80
LinkDB
All DBs
Position
Sna5:complement(50191567..50200753)
Genome browser
AA seq
888 aa
AA seq
DB search
MYTHTMILLGFVWFSPPLLVILASPTPASNDKRGPCQVYNSGRSANCLGQRLDHVPWKHL
PSTLERIDLSYNELHAIRVNYFSRLPHLRVLELQFNNISVIEDRAFHNNPLLEHLNIFNN
SLEEIPANALRDLFNLRELLMSNNLYTQATLSADVFSRLTHLKALSMGGPLVKGLRKGDF
QALRNIQLQDFAIKTSSNISYYEPGSLKVIQTGRMGFDMAIDQKPNFLPLILRDLANKTF
SLIQFRNLFEFMYYLGDEDIFRGLQDIKVDSLIFHRGKFNEKLMRMALFNLQVTPLKRLT
LQYIDFARSPNFVDNGLGSSIKDLALSRLNLWHISNPDILRFDWRFTWFNKVRLLSIQNV
NFKSVPCDAWLNMEGMEVLDISNNRLQDNILFNQRCDYRGNMPALRSFNVSTNQLTSLQD
LASLTREFKQLKVMDVSHNMLGSAEKSHNCNWMQNITHVIAHHNRFESGALQCLPTTVQF
LDLSYCDLDQLDMAYFQQTISLKELLLNGNKIKFIPSGWRSRSLQSLALDGNSFGLISMG
SFQDMPQLSRLTAGNNPFHCTCDLHAFIQDTISKGKVNITDWPENYKCYHPEALLNTAVA
NFFPGHVACDIRLVIIICVATTAAVVLVLMLICYIFNVPWYTKATYQILRAKYRAHQEGT
SGKSQIYAYHAFISYSHPDADWVRDQLLPCLENSKPPYRLCIHERDFMPGKWIIDNIIEN
MESSEKVIFVLSHHFVNSDWCNYELYFAQQRAIGKTFSDVILVVKEPIDPESLPSKYCKL
KKMLNTKTYLEWPQQAKQQTFFWAQLRSCLGKPTVTREQALSGRSSSVSSVGAVPVIELP
LEDGKPAIAMPNLDREAELHKVVPQEIKNLSARSAEFYGQRPIPVAVA
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtacacgcacacaatgattctactgggttttgtgtggtttagtccgccacttcttgtg
atccttgcctcaccaacccctgcttcgaatgataagagaggcccctgtcaagtctacaac
tctggtcgctctgcaaactgccttggtcagcgactggatcatgttccatggaagcacctc
ccttccacgcttgaaaggatagatctctcctacaatgaacttcatgccattcgtgttaat
tacttttctcgcctacctcatcttcgtgtcctcgagctgcagttcaacaacatctctgtg
attgaggaccgtgccttccacaacaaccccctcctggagcatcttaacatctttaacaac
tccctagaggaaatccctgccaacgccttgcgggacctctttaatctaagggaactcctt
atgtcgaataacctttacacccaggccacattgtcagctgacgttttctccagattgacc
cacctcaaggccctgtccatgggcggccccttggtcaagggtctaaggaaaggggacttc
caggcattgaggaacattcagttgcaggactttgctattaaaacttcatcaaatatcagt
tactatgaaccgggtagtctgaaggtgatccagacaggtagaatgggttttgacatggcc
atagatcagaagccgaatttcctacctttgattctacgagacttggccaacaagactttc
agtctcatccaattcaggaacctctttgagttcatgtattacttgggagatgaggatatt
ttcagaggcttgcaagacatcaaagtagattcgctcatctttcaccgtggaaaattcaat
gagaagcttatgaggatggctctgtttaatctacaggtcaccccccttaaacgtctgaca
cttcaatacattgactttgctcgctcgcccaactttgtggataatggcttgggctccagt
atcaaagaccttgctctgagtagactaaatctgtggcacatcagcaatccagatattttg
cgattcgactggcgcttcacatggttcaacaaagtccgactgctgtccattcagaatgtc
aacttcaaatctgtgccttgcgatgcctggcttaatatggaaggcatggaggttttggac
atatcaaacaaccgcctgcaggacaacatcctcttcaaccagagatgtgactacaggggc
aacatgccggctcttcgttccttcaatgtcagcaccaaccaactgaccagccttcaggac
ttagcctccctgaccagggagttcaaacagttgaaggtcatggatgttagccacaacatg
ctgggctctgctgagaagagtcacaactgtaactggatgcagaacatcacccatgtgatc
gctcaccacaaccgattcgaaagtggtgccctccagtgtctgcccaccacagtacaattc
ctggacctctcgtactgtgacctggaccagctggacatggcctacttccaacaaaccatc
agcctcaaggagctcctgctcaatgggaacaagatcaagttcatcccctctgggtggaga
agtcgctccttgcagtcactggctctggatgggaactcctttgggctcatcagcatgggc
tccttccaggacatgccccagctttctcgactgacagcagggaacaacccattccactgc
acctgcgacctccacgccttcatccaggacacaatttccaaggggaaggtcaacatcact
gactggccagagaactacaagtgttaccatccagaggccctgctcaataccgctgtggca
aatttcttcccgggtcatgtggcctgcgatatcagactggtcatcatcatctgtgtggct
actactgctgctgtggttttagtgttgatgcttatatgctacatattcaatgttccctgg
tacaccaaagccacatatcagatcctcagagccaaatacagggctcatcaggaaggaaca
tctggaaaatcacagatctatgcttaccatgcattcatctcctacagccacccagatgca
gactgggtcagggaccagttgttgccctgcttggagaacagcaagcccccctaccgactc
tgtatccatgagagagacttcatgccaggaaaatggatcatcgacaacatcattgaaaat
atggagagcagcgaaaaggtcatatttgtgttgtcacaccactttgtgaacagcgattgg
tgcaactacgagctctactttgctcagcaaagagccatcggcaagaccttcagcgatgtt
attctggtggttaaagagcccatcgaccctgaatctctgcccagcaagtattgtaagctc
aagaagatgctgaacaccaaaacgtacctagagtggccccagcaagccaagcagcagacc
ttcttctgggctcaacttaggagctgcctgggcaagcccacagtgactagagagcaggct
cttagtggtaggagcagcagtgtatcctcagtgggcgctgtgcctgtgatagagcttcct
ctagaggatgggaagccagcgatagctatgccaaatttagacagagaagcagagctccac
aaagtagttcctcaggagatcaaaaatctttcagcgagaagtgcagagttttatgggcaa
agaccgatccctgtagccgtggcatga
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integrated database retrieval system
