KEGG   Salvelinus namaycush (lake trout): 120049602
Entry
120049602         CDS       T07522                                 
Name
(RefSeq) transcription factor p65-like isoform X1
  KO
K04735  transcription factor p65
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04010  MAPK signaling pathway
snh04137  Mitophagy - animal
snh04210  Apoptosis
snh04218  Cellular senescence
snh04620  Toll-like receptor signaling pathway
snh04621  NOD-like receptor signaling pathway
snh04622  RIG-I-like receptor signaling pathway
snh04623  Cytosolic DNA-sensing pathway
snh04625  C-type lectin receptor signaling pathway
snh04920  Adipocytokine signaling pathway
snh05132  Salmonella infection
snh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    120049602
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    120049602
  09143 Cell growth and death
   04210 Apoptosis
    120049602
   04218 Cellular senescence
    120049602
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    120049602
   04621 NOD-like receptor signaling pathway
    120049602
   04622 RIG-I-like receptor signaling pathway
    120049602
   04623 Cytosolic DNA-sensing pathway
    120049602
   04625 C-type lectin receptor signaling pathway
    120049602
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    120049602
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120049602
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120049602
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:snh03000]
    120049602
Transcription factors [BR:snh03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   RHR (Rel homology region) Rel/Ankyrin
    120049602
SSDB
Motif
Pfam: RHD_DNA_bind RHD_dimer
Other DBs
NCBI-GeneID: 120049602
NCBI-ProteinID: XP_038851824
UniProt: A0A8U0R1I7
LinkDB
Position
Sna6:complement(9640422..9659422)
AA seq 599 aa
MDGMYGWGQPPLKQGNSFIEIIEQPKPRGMRFRYKCEGRSAGSIPGEKSNDTTKTHPAIK
VHNYNGPLRVRVSLVTKNPPHKPHPHELVGKDCKHGYYEADLQERRVHSFQNLGIQCVKK
KDVNEAVSCRLQTQNNPFNIPEAKVWEEEFDLNAVRLCFQASITLPTGELHPLEPVVSQP
IYDNRAPNTAELKICRVNRNSGSCRGGDEIFLLCDKVQKEDIEVRFFQDSWEGKGTFSQA
DVHRQVAIVFRTPPFYNTNLTEPIRVKMQLRRPSDREVSEPMDFQFLPSDPDEYRLIEKR
KRTEGMFQNLKLGSISGAMPAERPFNTARRTVTAKPAASQPVNPVAPPRAASVKPQPYYN
SPQPGQLFQPQPKAEPSSTPAETWKFLNSLTLDSQHKATPVARFTTNPQASAATSQAFPT
VNLSDLHGFTFSTFASPQEPVSAAATPEPTSTFVQDSQFRVDGPMVDEELPEFPSFSEVH
QSGTLDNINIDDFQAMLVQSGLAGEGPGNSRVSVSQAPCHLPATNPVVNNSCGGSTWMNY
PNSIVNLLQSEGMIDSSPGNSNQPAVLDDLDVFSSMDEDRLMSILNSGNQAGFVSGHQT
NT seq 1800 nt   +upstreamnt  +downstreamnt
atggatggaatgtatggatggggacagccccctttgaaacaagggaattctttcatagag
atcattgagcagcccaagccgagaggcatgaggttcaggtacaagtgtgaggggcgctcg
gcgggcagcatcccgggagagaagagcaacgataccaccaagacacaccctgccatcaag
gtgcacaactacaatggtcccctgcgtgtccgtgtctccttggtgaccaagaacccgcct
cacaagccccacccgcacgagctggtggggaaagactgcaaacatggctactatgaggca
gacttgcaggagagacgagtacacagttttcagaacctgggcattcagtgtgtgaagaaa
aaggatgtgaacgaagcagtttcctgtagactgcagacccaaaacaaccccttcaacatt
cccgaggcgaaggtgtgggaggaggagtttgacctgaatgcagtgaggctttgtttccag
gcctcgattactctacctaccggtgaactccaccctctggagcccgtggtgtctcagccc
atctacgacaacagagcacccaacacagcagaattgaagatctgtcgagtgaacagaaac
tctgggagctgcagaggaggggatgagatcttcctactctgtgacaaagtgcaaaaagag
gacatcgaggtacggttcttccaggactcgtgggaggggaagggcaccttctcccaggcg
gacgtccacaggcaggtagccatcgtgttccgtaccccgcccttctacaacaccaacctg
accgagccaatcagagtgaagatgcagctccgcaggccctcggaccgcgaggtcagcgag
ccaatggacttccaattcctgccctctgacccagatgaatatagactgatagagaagcga
aaacggacagagggaatgttccagaatctgaagctggggtccatatcaggggccatgcca
gcagagaggcctttcaacactgccagaagaacagtcactgccaagccagcagctagccag
cctgtgaacccagtggcgccccctcgtgccgcctctgtgaagccccagccctactacaac
agcccccagcctggccagctgttccaaccccagcccaaagcagagccctcctccactcca
gcagagacctggaagttcctcaacagcctgaccttggactcccaacacaaagccaccccc
gtggcccgattcaccaccaacccccaggcatctgcagccacctcacaggccttccccacc
gtcaacctgtcggacctccacggcttcaccttctccaccttcgctagtccccaggagcca
gtgagcgcagccgctaccccagagcccacctctacctttgtccaggattctcagttcagg
gtggatggccccatggtggatgaggagctacccgagttccccagcttctctgaggtccac
cagtcagggacactagataacataaacatcgacgacttccaggctatgctggtccagagt
ggtctggctggagaggggccagggaacagtagggtgtcggtctctcaggcaccctgccac
ttacctgccaccaaccctgtggtcaacaacagctgtggcggcagcacctggatgaactac
cccaacagcatcgtgaacctgctccagagtgagggcatgatcgacagttctcctggcaac
tccaaccagccggccgtcctcgacgacctggacgtcttcagctccatggacgaagaccgt
ctcatgtccatcctgaacagtggcaaccaggccggtttcgtgtccggacatcagacttag

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