Salvelinus namaycush (lake trout): 120049675
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Entry
120049675 CDS
T07522
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
snh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120049675
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120049675
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120049675
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Nectin family
120049675
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
V-set
I-set
Ig_2
ig
C2-set_2
TMEM154
LapA_dom
LST1
Protocadherin
DUF7237
FAM176
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
120049675
NCBI-ProteinID:
XP_038851950
UniProt:
A0A8U0QYM7
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Position
Sna6:14908112..14930147
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AA seq
611 aa
AA seq
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MTSLLGGLTPLLWILGSFIAVVQGDFEEPSPGFSVQSLTEVETQLLCRFKVEVGQVVVQV
TWTKERADGTKDQIITVHHTAGQTEFGQYSGRVRFRSNEPTVDSSLIIMNTVESDEGRYN
CHISTFPSGNFERQLSLTVWTTPISSLDPVILVEGQSFRLAASCRSVARPPPILNWDTDL
TGLSQNRSSVGGSVSTHFSLHPLRSMNGMRLDCLVRHSALKEPRRITNNLVVHYPPNAEI
SGFNQNWYAGLEGASLSCVSGGNPKPQSFTWTRKGGDLPEGVTAGNGSLLFNRPLGPTDA
GIYQCVAYNVVGTGKAEVEITVTEFPQKPVFFNSLLMIIIGGVAGGLLLIMVIIVISVTR
HHKRKNKKLERELTVKKDEISTLSRQASFRRVNSVSTDARGQMEENIPLRVEGTLRTSLS
SLGELGRIRDSRSTLVGGGGLDYLGRPVLNNSSRRGRETRAMDREEENRLRVESYVRNST
MSLGTRLHLPIQPSPFPMEHSTMLLRSLNGSVIIPTEGGLHARNSPLSYPPVTDDEEEEG
ESVEGERGTSSRMSRLDQGRSEDQDNSSQISDAERGHNHHFQQNNGTLRPKPRPNGIPSP
HASLIHKAQIV
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgctcctgggcggactgacaccgctgctgtggatccttgggagtttcattgct
gtggtgcagggggactttgaggaaccatctcccgggttctcggtgcagtccttgaccgag
gttgagacccagctgctctgccggttcaaggtggaagtgggccaggtggtggttcaggtc
acctggaccaaggagagagcagatggtaccaaggaccagatcatcacagtacaccacact
gccggacaaacagagtttggtcagtactcggggcgtgtgcggttccgcagcaatgagccc
acagtggactcgtctctgatcatcatgaacactgtggagtcagatgagggcaggtacaac
tgtcacatcagcaccttcccctcggggaactttgaacgacagctgtcactcaccgtgtgg
accacgcccatctcctccctggaccctgtgattcttgtcgagggccagtcctttcgattg
gctgcctcctgccgctccgtggcccgccccccgcccatcctcaactgggacacagacctg
acgggcctgtcacagaacaggagctcggtgggcgggtcagtctccacccacttctccctg
caccccctgaggagtatgaacgggatgagactggactgtctggtgaggcactctgctctg
aaggaaccccgcaggatcaccaacaacctggtggtgcactatcctcccaatgcagagatc
tcagggtttaatcagaactggtatgctggtctggagggagcttccctcagctgtgtcagt
ggaggaaaccccaaaccacagagtttcacctggaccaggaagggtggagacttaccagag
ggcgtgacggcagggaatggatccctgctgttcaataggcccctcggcccaacagacgct
ggtatctaccaatgtgtggcctataacgttgtggggaccgggaaagcagaggtggagatc
actgtgacagagttccctcagaagccggtgtttttcaacagtctcctgatgatcataatt
ggaggggtggctggaggactgctactcatcatggtcatcatagtaatctcagtgacccgt
caccacaaacgcaaaaacaagaaactggagagagaattgactgtgaagaaggatgagatc
agtactctctccaggcaggcctctttcaggagagtcaactcagtcagtacggatgctaga
ggacagatggaggagaatatccctctcagagtggaggggacactgcggaccagtctgtcc
tctctaggggagctagggcgcatcagggacagtcgctctactctggtagggggaggtgga
ctagactacctgggccgacctgttctgaacaactcttcacgacgagggagggagaccaga
gccatggacagagaggaggagaacagacttagggtggagtcatacgtacggaatagcact
atgtctttgggaacccgtctccatctgccaatccaaccctctccctttccaatggaacat
tccaccatgctgctgaggtccctgaacggcagcgtcatcatcccaacagaggggggttta
catgcacggaactcccctctcagctaccctcctgtcacagatgacgaagaggaggagggt
gaaagtgtggagggagagcgggggacaagctccaggatgagtcggttagatcaggggagg
tcagaggaccaggacaacagttctcagatctcagacgcggaacgtggacacaaccatcac
ttccagcagaacaacggaacgctgagacccaaaccccggcccaacggcatcccatcccca
cacgcctccctcatccataaggcccagattgtatag
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