Salvelinus namaycush (lake trout): 120050077
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Entry
120050077 CDS
T07522
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120050077
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120050077
04261 Adrenergic signaling in cardiomyocytes
120050077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120050077
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120050077
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
DUF2201
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
120050077
NCBI-ProteinID:
XP_038852638
UniProt:
A0A8U0R0I0
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All DBs
Position
6:complement(44732505..44803875)
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AA seq
927 aa
AA seq
DB search
MCVYVYVFVYPTATIVLNELNWTDALEAVFRKNKEEDPTLLWQVFGSATGLARYFPASPW
MDSRKTPNKIDLYDVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIHTSVSEMLETL
SDDDYVNVVYFNDKAVKAACFQNLVQANVRNKRFLKDAVRNISAKGITNYKGGFELAFEQ
LSSLNVTQGRALCNKIIMLFTDGGEERAQEIFQKYNADKKVVRIFTFSVGQHNYDKGPIQ
WMACTNKGYYYEIPSIGAIRINTQEYLDVLGRPMVKANNKAKQVQWTNVYQDALELGLVI
TGTLPVFNKTNTKADKERGLQRPQNQLILGVMAIDVSLDDIKRLTPRFTFGPNGYYFAID
PNGYVLLHPNLCPKNPKFQEPVTLDFLDAELEDEIKVEIRTNMINGETGHRTVHTLVKSQ
DERYIDRSERLYTYAPVKGTDYSLALVLPVYSLHYIHTTIGDTITQAKFSESLQEDKFEE
YGYTLIAPREYCKDLKPSKNNTEFLMDFNEYIDRKTPNNPLCNVDLVNRLLLDAGITSDL
VKQWRDQMPNGVLARFVATDGGITRIYPKSAGLDWTEDPETYESSFYKRSLDNDIYIFTP
TPYQEDTNRTEDSVLVSRAVNLDIDGVRLKPAVVGVKLDISTWMTNFINATLKMNCKDEI
CGCQRNDEHVDCVILDDGGFLVMANRDEYIGQIGQFFGMIDPILMVNLVNMSLFTLNKTY
DYQSVCDPKRESKGSAAGLRSVYVPTIADILNVGWLASAAAWSILQQLLVSIAFPNFLHA
ADTDEEIPDMSKESCITEQTQYFYDNEEKSFRGTLDCENCSRMFHAEKLWKTNLVFVIAD
AKLTCMSCDHKPLIQAEQPSEGPDPCEMAEKPRFRKGPDACFDNNEREEDFDCGGASALS
PSLLAMVALQLALLWLLAGSTHHAVPS
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtatgtgtatgtgtttgtctatcccacagccaccattgtgctgaatgagctg
aactggacagacgcattagaggccgtgtttaggaagaacaaggaagaggatcctactcta
ctgtggcaggtgttcggcagcgccaccggattggctcgctacttcccagcatccccttgg
atggactcgcgaaaaacgcccaataagatcgacctctacgacgtccggcggcgaccgtgg
tacatccagggggcagcgtcgcctaaggacatgctgatcctagtggatgcgagtggcagt
gtctctggcctcaccctgaagctaatccacacctctgtcagcgagatgctggagaccctg
tctgacgatgactacgtcaatgtggtctatttcaatgataaagcggtgaaggcggcgtgc
tttcagaacctggtccaggccaacgtgcggaacaagaggttcctgaaggatgctgtgcgg
aacatctcagccaagggcatcacaaactacaaaggcggcttcgagttggccttcgagcag
ctctcatcgttgaacgtgacccagggcagggcgttgtgtaacaagatcatcatgctgttc
actgacggaggagaggagagggcccaggagatcttccagaagtataacgctgacaaaaag
gttgtgcggatattcacgttctcagtgggccaacacaactatgacaaaggaccaatccag
tggatggcctgcaccaacaaagggtactattatgaaatcccctccatcggtgctatcagg
atcaacactcaggagtacttggatgtactgggaaggcccatggtcaaagcaaacaacaag
gccaagcaggttcaatggaccaacgtttaccaggacgcactggagctgggtctggtgatc
acaggaacacttcccgtcttcaacaagaccaacaccaaagctgacaaagagaggggacta
cagaggccccaaaaccagctgatcctgggagtgatggctatcgatgtgtctctggacgac
atcaaaagactaacgccaagatttacatttggaccaaatggctattactttgccattgac
cccaacggttacgtcttgctgcatcccaacctctgcccaaagaatcctaaatttcaggag
cctgtaactctggacttcctggacgctgagctggaggatgagattaaagtagagataaga
acgaacatgattaatggagaaaccggccaccgcaccgtacacacactagtgaagtcccag
gatgagcggtacatagaccgaagcgaaagattgtacacatatgcccctgtaaagggtaca
gattacagtctagccttggtccttccagtgtacagcctgcattacatccacactactatc
ggagacaccatcacccaggccaaattctctgaaagcctgcaggaagacaagtttgaggag
tatggatacactctcattgcaccaagggagtattgtaaggatctgaagccgtctaaaaac
aacacagagttcctgatggacttcaacgagtacatcgacaggaagactcccaacaaccca
ctgtgcaacgtggatctggtgaacagattgttgctggacgctgggatcacgtcagacctc
gtcaagcagtggagagatcagatgccaaatggagtcctggccaggtttgtggccactgat
ggaggaatcactcgcatttatcccaagagtgctggactagactggacagaggacccagag
acgtacgagtcaagcttctataagagaagtctggacaatgacatctacatcttcacacca
acaccctaccaggaggacaccaacaggactgaggactcagtcctggtgagcagagcagtg
aacctggacattgatggagtcagactcaaaccagcagttgtgggagtgaaactggacatc
agtacctggatgaccaacttcatcaatgctactctgaagatgaactgtaaggacgagatc
tgtggttgtcagaggaatgatgagcatgtggactgtgtcatcctggatgatgggggattc
ctagtcatggccaatcgggatgaatacatcggtcagatcggccagttcttcgggatgatc
gaccctatcctcatggtcaacctggtcaacatgtctctgttcacgctcaacaagacatac
gactaccagtcggtctgcgaccccaagagggagagcaaggggtccgcggcgggcctgcgc
tcagtctacgtgcccaccatagcagacattttgaacgttggatggttagcatcagcagca
gcctggtcgatactacaacagttgttggtcagcatagcgttccctaatttcctgcacgca
gcggacactgatgaggaaatacctgacatgtccaaggagagctgtatcacggagcagact
caatacttctatgacaacgaggaaaagtccttcagaggaacgctagactgtgaaaactgc
tccaggatgttccatgctgagaagctgtggaagaccaacctggtgttcgtcatcgccgac
gccaagctcacctgcatgtcatgtgaccacaaacccttaatacaggccgagcagccttct
gagggaccagacccatgtgaaatggctgagaaaccaaggttccgaaaaggtccagatgcc
tgtttcgacaacaacgagagggaggaggactttgactgtggcggggcgtcggctctgagc
ccgtccctgttggccatggtggcgctgcagctggccctgctctggctcctggctggctca
actcaccacgccgtcccctcgtga
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