Salvelinus namaycush (lake trout): 120050608
Help
Entry
120050608 CDS
T07522
Name
(RefSeq) vascular endothelial growth factor receptor 1-like
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04020
Calcium signaling pathway
snh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120050608
04020 Calcium signaling pathway
120050608
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120050608
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
snh01001
]
120050608
Enzymes [BR:
snh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
120050608
Protein kinases [BR:
snh01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
120050608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_3
I-set
Pkinase
VEGFR-1-like_Ig-like
ig
Ig_2
Ig_VEGFR-1-like_5th
VEGFR1-3_N_Ig-like
V-set
VEGFR-2_TMD
Ig_4
C1-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
120050608
NCBI-ProteinID:
XP_038853128
UniProt:
A0A8U0UHT0
LinkDB
All DBs
Position
Sna7:complement(12438408..12504503)
Genome browser
AA seq
1258 aa
AA seq
DB search
MIGYIFVVLCGLAGSALAKGKVESVPKGKFSVPVLDVKSRQLVLEANQTLTIHCRGWWEL
SWAFPGGVARDQERMRLEDSRCGRQSQHYCSQLTLSSAQAQHTGSFRCRYSHQKLRQRAV
YVYVTDRQRPFVEEQNNSPDVVYMKESQPLVFPCRVTNPDATVSLVKFPDQELTPDQRNV
VWNSRQGFLIHSPTYFYIGLFSCKTTVNGTTHSLSYLTHRQVNKIMKVYLNSTSPVQSLQ
GESLAINCTVTAEWNSRVSISWDYPGQANRSAIVSRWIMASKFHMVFYSILSIPKLHRSD
RGLYICRVTSGPVSRETNVSVTVYDRPFIRLKPRQGAVVEAHAGQKSYRLSPKLRAFPAP
EVIWLKDGKVAAEECSRYHVDGNSLVIRDVAEEDAGKYTILVGIQEHRLYQNLTLSLVVN
VSPGIGEKAVSVQDPGSVPRGSRQALHCTSHGVPPPHITWLWHPCPPKGLCVCPPSSSMW
SPVKERAPGTSTHNHILSVTHRQEVLQGKNKTVGVLMVAEAFVSGVYRCIASSSVGKDEL
DMPFYVTDVPGGFSVSQEDEPREGGDLHLTCVANKHLYTNFSWQRVTDPAETTPLTPSLG
GELTSGEFSDTLSLLLSNLTAGDSGTYRCSAHHLLTGQNTHLDTQVDVTVLEAPVLLQNM
SDCSVNISSSVTLSCRAHGVPRPFITWYKDQHTLLQGSGIVIAQGGENLHIDRITVEDQG
LYTCQATNERGSAESSAYIWVHNSSGGLSLEIPTLTCTCLVATLFWLLLTLFIRKLKKPN
SSSAKAEYLSIILDPGEGPLEEQCDRLQYDPGQWEFPRDRLKLEKPLGRGAFGKVMQASA
FGIDNSTGCRTVAVKMLKEGATPSDHKALMTELKILNHIGHHLNVVNLLGACTKAGPLMV
IVEYCRYGNLSTYLKSKRDVFLLNKRTEERGVSKSPLFLEDLISYSFQVSRGMEFLASRK
CIHRDLAARNILLSENKVVKICDFGLARDLYKDLDYVRKGDARLPLKWMSPESIFDKVFT
TQSDVWSYGVLLWEIFSLGASPYPGLNIDEEFCHQLKEGTRMRSPEYSTPEIYSTMLACW
EANPSDRPTFTGLVETLGDLLEARVQQDGKDYIPLGTFLCGERDPDSSVQRDSTDSSLSD
LHPHRLISLGYMNTRSTATLRTFEELPSKDPPGPDDEQGDSGMVLPSEELKRLKWTSGAK
SLTRFFTISTCRENLVPCMCNDITGLHDEPPVLPCDCDSEESCSPPPDYNSAFLYPSL
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgattggctatatcttcgtggttctatgtggattggctggcagtgcgctcgcaaagggt
aaggtggagagtgtgcctaaggggaagttcagtgttcctgttctggatgtgaagagtcga
cagctggtcctggaggccaaccagactctgacaatccactgcaggggttggtgggagctg
tcgtgggcattccctggaggtgtggccagagatcaggagagaatgcgattggaagattct
cgctgtggtaggcagagccagcattactgcagccaactgacgcttagctcggcgcaggcg
cagcacacaggatcgttccggtgtcggtacagccatcaaaagctcaggcagagagctgtc
tatgtctatgtcacagacagacagcggccatttgtggaggagcagaataacagtccagac
gttgtgtatatgaaggagagccagcctctggtcttcccctgtagggtcaccaaccctgac
gccactgtctcattggtcaagtttcctgaccaggagttgaccccagaccagaggaacgta
gtgtggaacagcagacagggcttcctcatccacagccccacctacttctacatcggcctg
ttctcctgcaagaccactgtcaacgggaccacacactccctcagttacctcacacataga
caagtgaataagatcatgaaggtatatctgaacagtaccagtccagtccagtctctacag
ggggagagtctggccatcaactgtactgtcactgcagagtggaacagcagagtgtccatc
agctgggactaccctggacaggccaacaggtcagccatagtcagtaggtggatcatggcc
agtaaatttcacatggtgttctacagtattctgtccatccccaaactccaccgctctgac
agagggctttatatctgccgagtgaccagtggaccggtcagtcgagagactaacgtatct
gtcacagtctatgaccgtccctttatccgtctgaagcccagacagggggctgtagtggag
gctcatgcaggacagaagtcctaccgtctctcccccaaactacgagccttccctgcccca
gaagtcatctggttgaaggatgggaaggtggcagcggaggagtgttcccgttaccatgtg
gacgggaattccctggtgatccgtgatgtggcggaggaggatgcagggaagtacactatc
ctggtgggaatccaagaacacagactctaccagaacctaacgctctctcttgtggtcaac
gtgagtcctgggataggggagaaggcagtgtcagtgcaggacccaggcagtgttccgcgg
ggtagcagacaagccctgcactgcacctcccacggagtcccccctcctcacatcacatgg
ctctggcacccctgcccccccaaaggcctgtgtgtgtgtcctccgtcctcctcaatgtgg
agccccgtaaaagagagggcccccggcacttccacacacaaccacatcctgagtgtcaca
cacagacaggaagtcctccaggggaagaataagaccgtgggggttttgatggttgctgag
gcgtttgtgtccggcgtgtatcgctgtattgcctctagttctgtgggaaaggatgagctg
gacatgcccttctatgtaacagacgtcccaggaggcttcagtgtgagtcaggaggatgag
ccaagggagggaggagacctacacctcacctgcgtagccaataagcacctgtacaccaat
ttttcatggcaacgggtgactgacccagcagagaccacacccctgaccccctccctgggt
ggtgaactgacctcaggagagttttctgacactctgagtctattgcttagcaacctgacg
gcgggggattctggaacctaccgctgctccgcccatcacctgctgacgggacagaacaca
catctggacacacaggtggacgtcacagtactggaggctccggtgctgttacagaatatg
tctgactgcagcgtgaacatcagcagctcagtgacactcagctgccgcgcccacggagtg
ccacgcccattcatcacatggtacaaggaccaacacacactgcttcagggatcaggtatc
gtcatagcacaaggaggcgagaacctccacattgaccgaatcacagtggaggaccagggt
ctgtacacctgccaggctaccaatgagagaggctctgctgagagctccgcctacatctgg
gttcacaactcatcaggtggcctgtctctggagattcctactctcacctgtacctgcctg
gtggccactctcttctggctgcttctcactctcttcatacgtaaactcaaaaagccaaac
tcttcgagtgccaaggctgagtacctttcaatcatcctggacccaggggaggggcctctg
gaggagcagtgtgataggctacagtacgacccaggccaatgggagttccccagagaccgc
ctcaaactggagaaacctctgggccgtggggcctttgggaaagtcatgcaggcgtctgcc
tttggcatcgacaactctacaggctgcaggactgtggctgtcaagatgctcaaggagggg
gctactcccagtgaccacaaggctctgatgacagaactgaagatcctgaaccacatcggc
caccacctgaatgtggtcaacctgctgggagcctgcaccaaggcagggcctctcatggtg
atagtggagtactgtaggtatggaaacctatccacctacctgaagagcaagagagacgtg
ttcctgctcaacaagagaacagaggagaggggtgtctctaagtctcctctgttcctggag
gatctcatctcctacagtttccaggtgtctcgaggcatggagttcctcgcctctcgcaag
tgtatccaccgtgacctggctgccaggaacattctgctgtctgagaacaaagtggtgaag
atctgtgactttggtctggccagagacctctacaaagacctcgactacgtccgcaaggga
gacgcaaggctgccattgaagtggatgtccccagagtccatctttgacaaggtgttcacg
acccagagtgacgtgtggtcctatggagttctgctctgggagatattctctctgggagcc
tctccgtacccaggcctgaacatagatgaggagttctgccaccaactaaaggagggaaca
cgcatgcggtccccagagtacagcactccagaaatttacagcaccatgctggcatgctgg
gaggctaacccctcagaccgccccaccttcactggcctagtggaaacactgggagacctg
ctggaggcacgagttcaacaggatgggaaggactacattcccctgggcacgttcctgtgt
ggagagagagacccagacagcagcgtccagagagactccacagacagctccctgtctgac
ctgcatccacacagactcatcagtctaggctacatgaacaccaggagcacagcgacactc
aggacctttgaggaactgcccagcaaggacccgcctggcccggacgatgagcagggagac
agcgggatggttctaccctctgaggaactcaaacgcctcaaatggaccagcggcgccaag
agcctcacaaggttcttcaccatcagtacgtgcagggaaaacctggtgccctgcatgtgt
aatgacatcactggtctccatgacgagccgcctgtcctcccatgcgactgtgactccgag
gagagctgttcccctccacccgactacaactctgccttcctctacccctccctctga
DBGET
integrated database retrieval system
