Salvelinus namaycush (lake trout): 120050733
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Entry
120050733 CDS
T07522
Name
(RefSeq) zinc finger protein GLI2-like
KO
K16798
zinc finger protein GLI2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
120050733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120050733
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
120050733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
120050733
NCBI-ProteinID:
XP_038853223
UniProt:
A0A8U0R1M6
LinkDB
All DBs
Position
Sna7:43685824..43754497
Genome browser
AA seq
1514 aa
AA seq
DB search
METSAPTTTEKKGSGLDGNGFIDLPKKLSPSAVTRAPHHVFPTFHTPIPIDMRHHEGRYL
YEPHTLHAMHGPGLGGSPVMSDISLIRLSPHAAGTGESPFSPAHPYFHPHMEHYLRSIHS
SPTLSMISAARGLSPADLAHEHLKERGLFGLPPPPPGASPAEFYHLMTSHRNPYGELLMQ
GGGAAAAHLPDYITPMEVSRFPSPRLTPRLNRKRALSISPLSDASIDLQTMIRTSPNSLV
AYINNSRSSSAASSSYGHLSVGGISPSFTFPHHINPMAYQQLLSQQRGLSVFGHTPPLIQ
PPPIFSSRQSALGLSSLPHSSHNHHNGSQSKNTCGDSAVSSTVNPMITKRSKVKTEVECP
RPLSPCSPHLGGMLDLKEDLDKDECKHEPEMVYETNCHWEGCSKEYDTQEQLVHHINNDH
IHGEKKEFVCRWDECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLENLKT
HLRSHTGEKPYVCDHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKVPGCTKRYTDPSSLR
KHVKTVHGPEAHVTKKQRSDLPLSRPVPPKENGENETGRGMEKMDSTSRGMEDYLQVKSI
KTEKSVMYQSSPGGQSSCSSEPSPLGGSTNHDSGVEMALHSGGGSMGDLTGLDDPSGPLM
DSLFSGLSSGTAGVGVGLHLRQHLGLSHIHRLEHLKKEKLKTARDSCQWANHHSAPPVQN
TKLPPIPASGSLLESGNMCGGPGSFSLSELCSSKVTVLNQLDHLMERRDSATSTVSSAYI
SRRSSGISPCYSSRRSSDASTFSGHRHHNISSTGSYDPISADLSRRSSDASQCGGGGGGG
RLPSNLSLTPAQHYHLKAKYAAATGGAPPTPLPNMERMSLKTCLALYRDASQGDSSSGYS
SFNTIVPSGVPRHCSGDMGSYNGRSMMPHEAPSNIPRRASDPVPRRPSLNPLSHHPQVQR
YNSTGNMQNLHPHASQPNQALSAPERRHPALQSHQPRSDDSLQRYPYCPRPPSISENVAM
ETMAGDMSGRRNSSEEEMMVLPDDVVHYITAQGGAGKSDCANGYNRQAQCGFHGNAINLN
PQQQQQFYHQRRMAVVDTNMSMNPSSAPQTMRLSCALSPGRPQQSFPSSPSKTSTMPVQW
NEVSSGTVEALHNPTQHLPFGRSNSNLAMVQQKQNFVSFQKQNLNSNQHIAQINHNLAHA
AQQGRYIQQQKADTRLSCVQQQSLQQQQPANANLNEPVSLEYGFNQGLGPSDANANQRSS
CSSMAVGGTVHTVDTQNSRLRTQPAGSQSSQVTFKDSGVNSSRMISHQQNYNIASQVQHP
IQNGGQILIQPRPPTEHKSLSRQHSGSMTIQRQNSIGNHCSNGNNTDNNVMFYTGQIHVF
EPNGNINMQMMTSSVVDVLQCPSDSTETSMTSPGVNNQVSSTVDSSNGTGAEEPQIDFDT
MLDDGDHSSLMSGTISPSILQSLSQTSSRLTTPRNSVTLPSLPLPVGGSNMAIGDMSSLL
TALAEENKFLSMMS
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggagacctctgcccccacgaccacagagaagaaaggctctggtctggatggaaacggc
ttcattgacctcccaaagaaactctcaccttcagctgtcaccagagcccctcaccacgta
ttcccgacgttccacacgcccatcccgattgacatgcgtcaccacgagggaagatacctc
tatgaaccacacaccctacatgccatgcatggtcctggactaggtggcagcccggtcatg
tcagacatctctctgatccgtctgtccccccacgcagccgggacaggggagtcccccttc
agccccgctcacccctacttccaccctcacatggagcactacctccgctccattcacagc
agcccaaccctgtccatgatctctgcagcccgcggactcagccctgcagacttggcacat
gaacacttgaaagagcggggtctgtttgggttgccccctccccctcctggagccagccct
gctgagttctaccacctgatgaccagccatcgtaacccctacggagagctgctgatgcag
gggggtggggcggcagctgcacacctgccagactacatcacccccatggaagtgtcacgg
ttccccagtcccagactgacccccaggctgaacagaaagcgagccctgtccatctcgcct
ctctcagacgccagcatcgacctgcagaccatgatccgtacctcgcccaactctctggtg
gcctacatcaacaactcacgctccagctctgcagctagcagctcctatggacacctctct
gttggaggcatcagtccgtcctttaccttcccacaccacatcaaccccatggcctaccag
cagctcctgtcccagcagagaggcctgagtgtgtttggccacacccctcctctcatccag
cccccacccatcttctccagtcgccagtctgccctgggtctctcctctctgccccactcc
tcacacaaccaccacaatggctcacagtcaaagaacacatgtggggactcggcagtgagc
agtacagtcaatcccatgatcaccaagaggtcaaaggtgaagacagaggtggagtgtccg
aggccgctgtccccatgctctccgcatctaggtgggatgctggacctgaaggaggacttg
gataaagatgaatgcaagcatgagccagagatggtgtatgagaccaactgccactgggaa
ggatgctccaaggagtatgacacgcaggaacaactggtccatcacatcaataacgaccac
atccacggggagaagaaggagtttgtgtgccgctgggatgagtgttccagggagcagaag
ccctttaaggctcagtacatgctggtggttcacatgaggagacacacgggggagaagcca
cacaagtgtacctttgagggctgctgtaaggcctattctcgcctggagaatctgaagacc
cacctgcgatctcacaccggggaaaaaccatatgtgtgtgaccacgagggatgcaacaaa
gccttctccaacgcctcggacagagccaagcaccagaatcgcacacactccaacgagaaa
ccctacgtgtgtaaagtccccgggtgtacgaagcgctacacggaccccagctctctcaga
aagcacgtgaagacagtccacggaccagaggcccacgtcaccaagaaacagcgcagtgac
ctgccgctcagcagacccgtgccacccaaagagaatggagagaacgagacaggccggggc
atggagaagatggacagcacctcgagaggcatggaggactacctgcaggtcaagtctatc
aagacggagaagtctgtgatgtatcagtccagccctggtggtcagtcgtcatgtagcagt
gagccgtcgccacttggcggttccaccaaccatgacagtggagtagagatggctctccat
agcggcgggggcagcatgggggacctgactgggctggacgacccctcggggcccctcatg
gactccctcttctctggcctctcgtctgggacagcaggggtcggggtgggcctccaccta
cgtcaacacctaggcctcagccacatccacagactagaacacctgaagaaggagaaactg
aagacggcgagggactcctgccagtgggccaatcatcattcagctcctccagtccagaac
accaagctaccgcccataccagcaagcgggtcccttctggagagtggaaatatgtgtggt
gggcctggatcgttcagcctcagtgagctgtgttccagtaaggtgactgtcctgaaccag
ctggaccatctgatggagcgcagggacagcgccaccagcaccgtctcctctgcctacatc
agccgccgctcctctggcatctccccctgctactccagccgccgctccagcgacgcctcc
acgttcagtggtcaccgccaccacaacatcagctccaccggctcctacgaccccatctct
gcagacctgtcccggaggtccagcgacgccagccagtgtggaggtggtggaggagggggg
cggctgcccagtaacctcagcctcacccccgcccagcactaccacctcaaggcgaaatat
gcggcggctacaggcggagccccacccacacctttacccaacatggagaggatgagtctc
aagacctgcttggccctctacagggacgcttcccagggagactcgtcgtctggttactcc
tccttcaacaccattgtccccagtggggttcccaggcactgcagcggcgatatgggaagt
tataacggccgcagcatgatgccccacgaagctccgtccaacattccccgtcgggctagc
gaccccgtcccccggcggccatccctgaacccactgtcccatcatcctcaggtgcagcgc
tacaacagcacgggcaacatgcagaacctccacccacacgcctcccagccgaaccaggcc
ctgtctgcacctgagcggcgccacccggcgctccagagccaccagccgcgctccgacgac
agcctgcagcgatacccctactgcccccggccgcccagcatctctgagaacgtggccatg
gagaccatggccggcgatatgagcggtaggcgcaacagcagtgaggaggagatgatggta
cttcctgatgacgtcgttcactacatcactgctcagggcggagctggaaagtcagactgt
gccaacgggtacaaccgacaagcacaatgtggtttccatggaaatgcaataaaccttaac
ccccagcaacaacagcagttttaccaccagcgaaggatggctgtggtggacaccaatatg
agtatgaacccttcgtctgcaccacaaaccatgcgcctctcctgtgccctaagcccaggc
cgtccgcagcagtctttcccctcctcacccagtaagacgagcaccatgccggtgcagtgg
aacgaggtcagctcagggactgtggaagctcttcacaacccaacccaacatctgccgttc
ggtcgaagcaactcaaacctcgccatggtccaacagaaacagaactttgtctcgttccag
aagcagaatcttaactccaaccaacacattgcacagattaaccacaacctggctcacgca
gcccagcaggggagatacatacagcagcagaaggctgacaccaggctgagctgtgtccag
caacagagcctacagcaacagcagcccgctaatgctaacctcaatgaaccagtgagcctc
gagtatgggtttaaccagggtctcggtcctagtgatgctaacgctaaccagcggtcctcc
tgtagtagtatggcagttggtggcacagtgcacactgtagacacgcagaacagccgactg
aggacgcagccagcggggagtcaatcgtctcaagtcacatttaaggatagcggtgtgaac
tcttcgcggatgatctcacatcaacagaactataacatagcgtcccaggttcagcatcct
atacaaaatggaggtcaaatactcatccagccaagaccgcccacagaacataagtctcta
agcagacagcattcagggtcaatgacaatccagcgacaaaactcaattggcaatcactgc
agcaatggcaacaacacagacaacaatgttatgttctacacaggacagatacacgtgttt
gagccaaacgggaacatcaacatgcagatgatgacatcatcagtagtagacgttcttcaa
tgtccctcagacagcactgagacctccatgacctcaccgggagtaaacaaccaggtctcc
agtacggtggactcgtccaatgggacaggggcagaggagccccagattgactttgacacc
atgctggatgacggggaccactccagcctgatgtcaggcaccatcagccccagcatcctc
cagagtctgtcccagacctcctccagactcaccaccccccggaactctgtcaccctgccc
tccctgcccctccctgtagggggcagcaacatggccatcggcgatatgagctccctgctc
accgcgcttgcagaagagaacaagttcctcagcatgatgtcataa
DBGET
integrated database retrieval system