Salvelinus namaycush (lake trout): 120051537
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Entry
120051537 CDS
T07522
Name
(RefSeq) cystathionine beta-synthase-like
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00260
Glycine, serine and threonine metabolism
snh00270
Cysteine and methionine metabolism
snh00670
One carbon pool by folate
snh01100
Metabolic pathways
snh01230
Biosynthesis of amino acids
Module
snh_M00035
Methionine degradation
snh_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
120051537
00270 Cysteine and methionine metabolism
120051537
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
120051537
Enzymes [BR:
snh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
120051537
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Motif
Pfam:
PALP
CBS
Methyltransf_12
Motif
Other DBs
NCBI-GeneID:
120051537
NCBI-ProteinID:
XP_038854402
UniProt:
A0A8U0R3F1
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Position
7:59129324..59151221
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AA seq
591 aa
AA seq
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MPAIPSLKDSSVLGPIGPVCPHAARLRVTNGNGDANGSSKIQEGPLQLPTKGGVRDKLEV
EDVTETIQAVGERKWIRPDLPSRCTWRLGGSHADSPHTHPQQTKAPKILTNILRRIGDTP
LVRMNKIPKTFGLKCEILAKCEYFNAGGSVKDRISLRMVEDAERAGHLKPGDTIIEPTSG
NTGIGLALAAAVKGYRCIIVMPEKMSMEKVDVLRALGAEIVRTPTSARFDSPESHVGVAW
RLKNEIPNSHILDQYRNPSNPLAHYDTTAEEILEQCDGKVDMLVAGAGTGGTITGIARKL
KERCPNIKIIGVDPEGSILAEPEELNKTDKTQYEVEGIGYDFIPTVLDRSVVDSWYKSND
EESFNMSRMLIRDEGLLCGGSSGTAMAAAVRVAKDLKEGQRCVVILPDSIRNYMTKFLSD
KWMFQKGFLKESDIMVNKPWWWNLKLQGLNLSAPLTVLPTVSCQKTIKILKEKGFDQAPV
VDEAGLILGMVTLGNMLASVLAGKIKPSDPVNKVIYNQFKQIRLTDNLGKLSRILETDHF
ALVVHEQIQYLTDGSPSLKQMVFGVVTAIDLLNFVTAREKRERSFSECSDL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcgatcccctcccttaaagacagcagtgttctgggccctatcggccctgtgtgc
ccgcacgctgccaggctacgtgtcaccaatggcaatggggatgccaacggatcctccaag
atccaggaagggccgttacaactcccaaccaaggggggcgtcagagacaagctagaggtg
gaggacgtgactgaaaccatccaggcggtgggggagaggaagtggatccgtcccgacctg
cccagccggtgcacctggaggctggggggcagccacgccgactccccccacacccatcct
caacagaccaaagctcctaaaatcctcaccaacatcctccggaggatcggtgacaccccg
ctggtgcgcatgaacaagatccccaagaccttcggcctcaagtgtgaaatcttggccaag
tgtgagtacttcaacgcgggcggcagtgtgaaggataggatcagtctgcgtatggtggag
gatgcagagagggcaggacatctcaaaccaggagacaccatcatagagcccacctcaggg
aatacaggtatcggtctggccctggctgcagctgtgaagggttaccgctgtatcattgtc
atgcctgagaagatgagcatggagaaggtggatgttttgagagccctgggcgcagagatc
gtccgtacgcccaccagcgctcgtttcgattcaccagagtctcacgtgggcgtggcttgg
cgtctgaagaacgagatccccaactctcacatcctggaccagtaccgtaaccctagtaac
cccctggcccactatgacaccacagcagaggagatactggagcagtgtgatgggaaagtg
gacatgctggtggcaggcgctggcacaggcggcaccatcactggcattgcccgcaaactg
aaggagaggtgccccaacatcaagatcatcggtgtggaccctgaaggctccatcctggct
gaaccagaggagctgaacaagacagacaagacccagtacgaggtggagggcatcggatac
gacttcatccccactgtactggacagatcagtggtggatagctggtacaagtctaacgat
gaggagtccttcaacatgtcccgtatgctgatcagagacgagggcttgctgtgtggtggc
agctcaggcacggccatggcagcggcggtgagggtggccaaggacctgaaggagggccag
cggtgtgtggtcatcctgccagactccatccgcaactacatgaccaagttcctgagtgac
aagtggatgttccagaaaggcttcctgaaggagtcagacatcatggtaaacaaaccctgg
tggtggaacctgaagctgcaggggttgaacctctctgcccctctgaccgtcctgcccacg
gtcagctgtcagaagaccatcaagatcctgaaggagaaaggctttgaccaggcccctgta
gtggacgaggctgggctgatcctaggaatggttactttggggaacatgctggcctctgtg
ctggctgggaagatcaaaccctcagacccagtcaacaaggtgatctacaaccagttcaaa
cagatccgtttgactgataacctggggaagctctctcgcatcctggagacggaccatttt
gccctggtggtacacgaacagatccaatacttgacggacggctcccccagcctgaagcag
atggtgtttggtgtggtgacggccatcgacttgctcaacttcgtcacggccagggagaag
agggagaggtccttctctgagtgcagtgacctgtga
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