Salvelinus namaycush (lake trout): 120052222
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Entry
120052222 CDS
T07522
Name
(RefSeq) beta-1,4-galactosyltransferase 1-like
KO
K07966
beta-1,4-galactosyltransferase 1 [EC:
2.4.1.22
2.4.1.90
2.4.1.38
2.4.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00052
Galactose metabolism
snh00510
N-Glycan biosynthesis
snh00513
Various types of N-glycan biosynthesis
snh00514
Other types of O-glycan biosynthesis
snh00515
Mannose type O-glycan biosynthesis
snh00533
Glycosaminoglycan biosynthesis - keratan sulfate
snh00601
Glycosphingolipid biosynthesis - lacto and neolacto series
snh01100
Metabolic pathways
Module
snh_M00071
Glycosphingolipid biosynthesis, neolacto-series, LacCer => nLc4Cer
snh_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
120052222
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120052222
00513 Various types of N-glycan biosynthesis
120052222
00515 Mannose type O-glycan biosynthesis
120052222
00514 Other types of O-glycan biosynthesis
120052222
00533 Glycosaminoglycan biosynthesis - keratan sulfate
120052222
00601 Glycosphingolipid biosynthesis - lacto and neolacto series
120052222
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120052222
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120052222
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120052222
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.22 lactose synthase
120052222
2.4.1.38 beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase
120052222
2.4.1.90 N-acetyllactosamine synthase
120052222
Glycosyltransferases [BR:
snh01003
]
Glycan extension
Type 2 chain/Poly-N-acetyllactosamine
120052222
Membrane trafficking [BR:
snh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
120052222
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120052222
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_7N
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
120052222
NCBI-ProteinID:
XP_038854973
UniProt:
A0A8U0UJJ5
LinkDB
All DBs
Position
8:57643384..57653711
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AA seq
321 aa
AA seq
DB search
MLPCNGTVNRERRIIVRDIFNSALRNSKKQKETTETKTQELKKCPDPSPLLVGPLRVEFS
TPVSLDTVRKENPGLQEGGRFKPHDCVALQKVALIIPFRHRDEHLKFWLYYLHPILQRQQ
LDYGVYVINQDGDNTFNRAKLMNIGYAEALKEYDYDCFVFSDVDIIPMNDRNTYKCFSQP
RHLSVSMDKFGFKLPYNQYFGGVSSLSKEQIMKINGFPNNYWGWGGEDDDIFNRMNDRKM
SISRPDGEVGKCRMIRHERDINNNDNPQRFKRITNTLKTMDTDGLNSLEYEVVAVEKHDL
FTNITVDVGIPPEDEEDMDKE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgttaccgtgcaatggcactgtcaacagagagcgcagaattattgtacgggatattttc
aacagtgctttgcggaacagtaagaaacaaaaagaaactacagagaccaaaacccaagaa
ttaaagaaatgcccagatccctctccacttctagttgggcctctcagggttgagttctct
acgcctgtcagcttggacacagtgaggaaggagaacccaggtctgcaggaaggaggtcgt
ttcaaaccacatgactgtgtcgccctccagaaggttgctctaatcatccccttccgccat
cgtgacgagcacctcaagttctggctctactacctccatcccatccttcagcgccaacag
ctggactatggtgtctatgttatcaatcaggatggagacaacacgttcaacagggccaag
ctgatgaacattggctatgctgaggccctgaaagagtatgactacgactgctttgtgttc
agtgacgtggacatcatccccatgaatgaccgcaacacctacaaatgcttcagccagccc
agacacctgtctgtctccatggacaagtttggcttcaagttgccctataatcagtacttt
ggcggtgtctcatcgttgagtaaagagcagatcatgaaaatcaacggctttcccaacaac
tactgggggtggggtggtgaagatgacgacattttcaacaggatgaatgacagaaaaatg
tccatctctcgtccggacggcgaagtcggaaaatgccggatgatccgtcacgaaagagac
ataaataacaacgacaatcctcagaggttcaagagaataactaacacgttaaagacgatg
gataccgatggcctcaactctctcgagtacgaagttgtcgcagttgaaaagcatgacctg
ttcacaaatattacagtagacgtggggataccacccgaagatgaagaagacatggacaaa
gaatga
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