KEGG   Salvelinus namaycush (lake trout): 120052890
Entry
120052890         CDS       T07522                                 
Name
(RefSeq) lysine-specific demethylase 2A-like isoform X1
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120052890
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:snh03000]
    120052890
   04121 Ubiquitin system [BR:snh04121]
    120052890
   03036 Chromosome and associated proteins [BR:snh03036]
    120052890
Enzymes [BR:snh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     120052890
Transcription factors [BR:snh03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    120052890
Ubiquitin system [BR:snh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     120052890
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    120052890
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     120052890
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box Cupin_8
Other DBs
NCBI-GeneID: 120052890
NCBI-ProteinID: XP_038856021
UniProt: A0A8U0ULI1
LinkDB
Position
Sna8:57305543..57324110
AA seq 1255 aa
MEDKRRPRFSKRLRSGTRRRYHDDGISDDEIEGKRTFDLEEKLTSERFTSDRVKRMEGKD
LTFEYIQRGGLRDPIIFEKPDGLGIKMPDPDFSVNDVKIFVGSRRMMDVMDVSTQKGIEM
SMAQWRRYYETPPSQRDKLYNVISLEFSHTKLENLVQRPASVDIIDWVDNMWPRHLKERQ
RDSTNSITDMQYPKVQKYCLMSVQGCYTDFHIDFGGSSVWYHILRGGKVFWLIPPTPQNL
ELYEDWVLSGKQGDIFLGDKAQDCQRIELKQGYTFMIPSGWIHAVYTPVDTLVFGGNFLH
SFNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLFSLTNTSYLTPDFQKHSLGI
GLTRDPSTCESVNGHTQEEDEEGAPPTQGSKPGVKVHLTPFELEGLWNLLGMLESLPSQK
NCVPAGIHDAPALLHDIRALLKEHANDIPKLSYTGKPIVKWPKRPSWYQPPPPPPPVARP
KLSATVVPPRPQKPASSMSVLRRRRVRCKRCEACVRTECGDCNFCRDMKKFGGPGKLKQT
CVLRQCLAPGLPLSVVCEICADGNQEGGEGPVFALTLMECSNCAQIAHPACLKVTGDGVV
NTDLPSCWECPKCVLGITDTEVKGDKNKMLHAKRKSSSYLDGRIAKIYRRRGHSRDDDDS
GSDDDDDDDEGGGGGTGQKMSGPRSRGSGSASRRGYGTGRRGIWRGSSHRGAGRGSALSP
HSSLKMRRGRGGLGAGRGDRDGGRRERGGRVRLRGGTRMQRRRDESEEDDDDDDDDEEDD
DSEEDRQHQRRRRRRTDDDEEDDDEEDDDEEDSSARDLEGEDEDVADEDEEDDENRSDSE
PEPPVLLVSDLNDDLLNGSYLTVTLQRPPRAKRHPGSIVPKLEAAMSPRTHGGGPGYVQH
KTLGKTLHKNGTVAAGNGLAQPAKNPVGRPPRHRINNPHGDTADRERERDTASHSSSDSS
ASPPTPPPHSSHSPSSLLSLPSFKDVGNEKGGEKEVWVAVFCYLSRAELASCMTVCKAWY
KWSCDKRLWSGVDVSRCPSLSSQAVQGIIKRQPTSLDLSWTPVSKRQITLLIHRLPGLKE
LMIAGCSWSSMSALSTPSLPCLRTLDLRWAEGVKDTQIRDLVTPPGCDSRSRLRGCVALR
LAGLDISDSTLRLILRHMPLLERLDLAHCRDLTDQSVCLLTAAGTRNTLTEINLAGCSKL
TDGCLVYLKRASGLALLDLRGCKGVTLRGCEGFISDLSHCVLFCMTEEKLIQRIS
NT seq 3768 nt   +upstreamnt  +downstreamnt
atggaagataagcgtcgaccaagattcagcaagcggctgcggtcgggcacgcggcggcgc
taccatgacgatggtatctcggacgacgagatcgaggggaagaggacctttgacctggag
gagaagctgacgagcgagaggttcacctcagacagggtcaaacgcatggaggggaaagac
ctcacctttgagtacatccaaagaggtgggttgagggacccgatcatctttgagaagcca
gacggactgggcatcaagatgccagatccagacttcagtgtgaacgatgtcaagatattt
gtcggcagcaggcgtatgatggatgtgatggatgtcagtactcagaagggtatagagatg
tctatggcccagtggagacgttactacgagacgcccccctcccagagggacaaactctac
aacgtcatcagcctggagtttagccacaccaagctggagaacctggtccagaggcctgcg
tcggtggacatcatagactgggtggacaacatgtggcctcggcacctgaaggagagacag
agagactccaccaactccatcacagacatgcagtaccccaaagtgcagaagtactgtcta
atgagtgtgcagggctgctacacggacttccacatagacttcggaggttcctcggtctgg
taccacatactgcgtggaggcaaggtgttctggctgatcccgcccacgcctcagaacctg
gagctgtatgaggactgggtgttgtcagggaaacagggagacatcttcctgggagacaag
gcccaggactgtcagaggatagagctgaagcagggctataccttcatgatcccctcaggt
tggatccatgcggtctacactccagtggacaccctggtgtttgggggaaacttcctccac
agcttcaacatccccatgcaactcaacatctacagcatcgaggacaggacacgggtacca
gctaagttccgttacccgttctactatgagatgtgttggtacgtgttggagagatacctc
ttcagtctgaccaacacctcctacctcacgcctgacttccagaaacactccctgggcatc
ggtcttaccagagacccctccacctgtgagtcggtcaacgggcacacccaggaggaggat
gaagagggtgctcccccgacccagggctctaagcccggggtgaaggttcacctcacgccc
tttgagctggaggggctgtggaacctgctggggatgctagagtctctgccctcacagaag
aactgtgtcccggcaggcatacacgatgctcccgctctgctgcacgacatcagggccctg
ctgaaggagcatgctaatgacatccccaaactgtcctacactggcaagcccatcgtcaag
tggcccaagaggccgtcgtggtaccagccccctccccctcctcccccggtggctcgtccc
aagctgtctgccacggtggtgcccccgcgaccccagaagcccgcttcctccatgtccgtg
ctgcggcggcggcgtgtgcggtgtaagcgctgcgaggcgtgcgtcaggacggagtgcggg
gactgtaacttctgcagggacatgaagaagttcggagggccggggaaactcaaacagacc
tgcgtgctccgacagtgtctggcgccgggtctgcccctgtcagtggtgtgtgagatctgt
gcagatgggaaccaggagggaggagaggggccagtcttcgccctcaccctcatggagtgt
tccaactgtgcccagatagcccaccccgcctgcctgaaggtaacaggggatggtgtggtg
aatacagatctgcccagctgctgggagtgtcccaaatgtgttctgggaatcaccgacact
gaggtgaagggggacaagaataaaatgttacacgcgaaacgcaagtcttcttcgtatctc
gacggtcgcatcgccaagatctaccgtcgccgtggtcacagccgagacgacgacgactcg
ggcagtgatgatgatgatgatgatgatgaaggcggaggaggcggcacgggacagaagatg
tccgggccacgctctcgcggcagtggctccgcctctcggagaggttacgggactgggagg
cggggcatttggagaggctcctcccacagaggggcaggccgcggaagcgcgctgtcccct
cactcctccctgaagatgaggcgcggcagaggagggctgggggcgggccgaggggataga
gacggggggcgtagggagaggggagggagagtgcgcctccggggaggcaccaggatgcag
agacgcagggacgagtcagaggaggatgacgacgatgatgacgacgacgaggaagatgac
gacagtgaggaagatcggcagcatcaacgccgcaggcggaggagaacggacgacgatgag
gaagacgacgatgaggaagacgatgatgaggaagacagctcggcccgggacctggagggg
gaggatgaggacgtggccgatgaggatgaggaagacgacgagaaccggtcagactctgaa
ccagagcctcccgtcctcctggtgtctgaccttaacgacgacctcctaaacggctcgtac
ctgacagtgaccctacagcgcccccccagggccaaacgccaccccggctccatcgtgccc
aagctggaggccgccatgtctcccagaacccacggcggcggtccaggttacgtccagcat
aaaaccctcgggaagacgctgcacaaaaacggcacggtcgccgccggcaacggcctggcc
cagcccgccaagaatccagtcggccggccgcctcgtcaccgtatcaacaatccccacggc
gacacagcagacagggaaagagagagggacactgcctctcattcctcctctgactcctcg
gcctccccccccacccctcctccccactcctcccactctccttcctcgctcctgtcgctt
ccctccttcaaggatgtaggaaacgagaaaggaggggagaaggaggtgtgggtggcggtg
ttctgttacctgagcagagccgagctggctagctgtatgactgtctgtaaggcctggtac
aaatggagttgtgacaagcgtctgtggagtggtgtggatgtatcgcggtgtccctccctc
tcctcccaggccgtgcagggcatcatcaaacgccagcccacctccctggacctttcctgg
acccccgtgtccaagagacagatcaccctgctcatacaccgcctgccaggtctgaaggag
ttgatgatagcaggttgctcctggtcgtccatgtcagccctgtccacccccagcctgccg
tgcctccgtaccctggacctgcgctgggcagagggggtcaaagacacccagatcagggac
ctggtcacaccaccaggttgtgacagtcggtctcggctgcgtggctgtgtggcgctgcgt
ctagccggcctggacatcagtgactccaccctgaggctgattctccgtcacatgcccctg
ctagagaggctggacctggcccactgcagggacctcacggatcagtccgtctgcctgctc
accgccgccggcacacgcaacacgctcacagagatcaacctcgcaggctgtagcaagctg
acggacggctgtctggtgtacctgaagagggcgtctggcctggcgctgctagacctgcgg
ggctgcaaaggtgtgacgctgcggggctgtgagggcttcatctcggacctctctcactgc
gtcctgttctgtatgacggaggagaaactcatccagaggatatcctaa

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