Salvelinus namaycush (lake trout): 120053242
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Entry
120053242 CDS
T07522
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120053242
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120053242
04261 Adrenergic signaling in cardiomyocytes
120053242
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120053242
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120053242
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
DUF2201
VWA_CoxE
Cache_3-Cache_2
Motif
Other DBs
NCBI-GeneID:
120053242
NCBI-ProteinID:
XP_038856316
UniProt:
A0A8U1BLG6
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Position
9:complement(32643910..32752142)
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AA seq
1055 aa
AA seq
DB search
MNGAEVRLDWIKEWVDQIQIELVTLADTASAGKSLTQIFLDNQNLYTVESNIAEELVARA
ARNIEQLLLKRAAALETLATAAENFQMEHQWEDEYADGDIVYYNAKDNLEVNHTEGRKNR
IRPAFKEDPLFKRFTSDNDTAVHIPTDIYDGSNIVLNELNWTEALEDVFKKNREDDPTLL
WQVFGSATGLARYYPASPWMDARKTPSKIDLYDVRRRPWYIQGAASPKDMLILVDASGSV
SGLTLKLIKTSVSEMLETLSDDDYVNVVYFNTRVNNTACFDHLVQANVRNKKILKDAVQN
ISAKGITNYTKGFEFAFEQLYATNITRANCNKIIMLFTDGGEERASAILQEYNSDKKVRI
FTFSVGQHNYDKGPVQWMACANKGYFYEIPSIGAIRINTQEYLDVLGRPMVLADQLAKQV
QWTNVYLDALELGLVITGTLPVFNKTKYKDELGIENQLILGVMGIDVSLDDIKKLTPRYT
IGPNGYYFAIDPNGYVLLHPNLQPKNPKFQEPVTLDFLDAELENDVKVQIRRIMINGKPG
EETIETLVKTQDERYIDRGVRTYTWAQVNGTDYSLALVLPMYSEHYIQAKLGDTIRQAMA
MDTLQVERFDELGHTFIAPREYCKGLKDKDNNTQFLLDFNHFIDRNTLSSPMCNMALVSR
LLLDAGLTADLVKLWKEQTLLGVLARFVTTDGGITRVYPRSAGEEWTENAETYDSSFYKR
TLDNDIYIFTAPYFNKSRESGYESGILVSKAVDLNIDRVNLKPAVVGVKLNVSAWMNSFM
NATMKVNCKDEICGCLKNDKHVDCVILDDGGFLLMSNQDEYITQIGQFFGEVDPVVMISL
VNTSLYSFNKTYDYQSVCNPERDCKAAAGPRSVYVPTIADMLSIGWWASTGAWSIMQQLF
YSLTFPRFLEAVDSDDDMSANMFKESCITEQTQYFFDNEDRSYSGVLDCGNCSRMYRAEK
LPNTNLVFLITDAKTTCLSCDPRPLRQAEQPSQGPDRCELAQNPRYRKGPDVCFDNNVDE
DDSDCGGGTSLSPSPWPMLGLQLLLLWLLTGPRHS
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagcagaggtgcgtctggattggataaaggaatgggtggatcagatacagata
gagctggtgacactggcagacacagccagtgccgggaagagcctcacacagatcttcctg
gacaaccagaacctgtacacagtagagtctaacattgcagaggaactagtggctagggca
gccaggaacatagaacagctgttactgaagagggctgccgctctggaaactctggccacg
gctgctgagaactttcagatggaacaccagtgggaggatgagtatgcggatggtgacatt
gtttactacaatgcaaaggacaatttggaggtgaatcacacagagggtaggaagaaccgg
atcaggccagcctttaaggaggacccgttgtttaaacgcttcacctctgataacgacact
gctgtacacatccctactgacatctacgatggctccaacatcgtgctgaatgagttgaac
tggacggaggcgctggaggatgtgtttaagaagaacagagaggatgaccctactctgctc
tggcaggtgtttggtagtgctactggactggcccgatactacccagcctctccatggatg
gatgctcggaagacccccagtaagattgacctatacgatgtacgcaggaggccctggtac
attcagggagctgcctctcccaaggacatgctgatcctagtggacgcgagtggcagtgtg
tctggtctgactctgaagctgatcaagacctcagtcagtgagatgctggagactctgtct
gatgatgactatgtcaacgtagtttatttcaacaccagggtgaataacacagcgtgtttt
gaccacctggtccaggccaacgtgaggaataagaagatcctgaaggatgctgttcagaac
atctctgctaaaggcatcaccaactacaccaagggatttgagtttgccttcgaacagctc
tatgcaactaacatcactagagccaactgtaacaagatcatcatgctgttcactgacgga
ggagaggagagagcatcggccatacttcaggaatacaactctgacaagaaggtgcgtatc
ttcaccttctcagtaggtcagcacaactatgataaaggtccagtccagtggatggcctgc
gctaataaaggatacttctatgagattccctcaattggagccatacgcatcaacactcaa
gagtacctggatgtactgggcagacccatggttttagctgaccagctggccaagcaggtc
cagtggactaatgtctacctcgacgctctggagctaggtctggtcatcacaggaacccta
cctgtcttcaacaagaccaagtataaagatgaattgggcatagagaaccagttgatccta
ggcgtgatggggattgacgtgtcactagatgacatcaagaagctcacaccgcgctacact
atcggacctaatggatattattttgccatcgaccccaacggatatgtgctgctacacccc
aacctccaacctaagaaccctaaattccaggagcctgtcactctggacttcctcgatgcg
gaactggagaacgacgtcaaagtccagatcaggagaattatgataaatgggaaaccaggt
gaagagaccatagagactctggttaaaactcaggatgagagatacatcgacagaggagta
aggacgtacacctgggctcaggtcaatggaacagactatagcttagccctagtcctgcca
atgtacagtgaacactacatacaggccaaactgggagacaccatcagacaggctatggca
atggacactctgcaggtggagaggtttgatgagttgggacacaccttcattgcccccagg
gagtactgcaaaggcctgaaggacaaggacaacaacacccagttcctcctggacttcaac
catttcattgacaggaacacactatcttctcctatgtgtaatatggctctggtcagtagg
ctgttgttggatgctgggttgacggctgatctggtcaaactgtggaaggaacagacactg
ctcggagtcctggccaggtttgtaaccactgacggagggatcactagagtctatcccaga
agtgctggggaggagtggacagagaatgccgagacctatgactcaagtttctacaagagg
actctggataacgacatctatattttcactgctccatatttcaacaagagcagggagtca
ggctatgagtcaggtattctggtgagcaaggctgtagacctcaacatagacagagtcaac
ctcaaaccagcagtggtgggagtgaaactgaacgtctctgcctggatgaacagcttcatg
aacgccaccatgaaagtcaactgcaaggatgaaatatgtggctgtctgaagaatgataag
catgttgactgtgtcatcttggatgatggaggctttctgctgatgtccaatcaggatgag
tatatcacacagataggtcagttctttggggaggtggacccagtcgtgatgatcagtctg
gtcaacacatctctgtactccttcaacaagacctacgactaccagtcagtctgcaaccct
gagagagactgcaaggctgctgcagggccacgatctgtttacgtgcccactatagcagac
atgctgagtataggctggtgggcctccacaggtgcctggtcaataatgcagcagctcttc
tacagtctcacattcccaaggttcctagaggcagtggactcagatgatgacatgtctgct
aacatgtttaaggagagttgtatcacagagcagactcagtatttctttgacaacgaagat
agatcctactcgggagtcctcgactgtggaaactgctccaggatgtatcgagctgagaag
ctgcccaacactaacctggtgtttctgatcactgatgccaagaccacctgtctgtcctgt
gaccccagaccactacgacaggcagagcaaccatcccaaggtccagatcgctgtgagcta
gctcagaaccccaggtacaggaaaggacctgacgtgtgtttcgacaacaacgtagacgag
gatgattctgactgtgggggcgggacctcactaagcccctccccctggcccatgttggga
ctccaactactgctgctgtggctcctcactggcccccgacactcatga
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