Salvelinus namaycush (lake trout): 120054776
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Entry
120054776 CDS
T07522
Name
(RefSeq) transcription factor E2-alpha-like isoform X1
KO
K09063
transcription factor E2-alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120054776
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Ubiquitous (class A) factors
120054776
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GFIT
Motif
Pfam:
HLH
DsbA_N
bHLH_IRO3
Motif
Other DBs
NCBI-GeneID:
120054776
NCBI-ProteinID:
XP_038858317
UniProt:
A0A8U1BSQ3
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Position
Sna10:complement(17224580..17248019)
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AA seq
680 aa
AA seq
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MNEQQQQRMTAVGTQDKELNDLLDFSAMFAPPVANGKNRPTTLASSQFGGSALDERNGSG
SWGPGEQNSPPFNQGRGYGDGSHYNEHEGLSSPFLSSGIGGKNERIPYSSFGGQPGFLPS
DIAMPSPDAMSPSGLKSTSQFYPGSYPNNPRRRPPDGQLDTQPKKIRKPPGLPSSVYASS
SGDEYTRDNGGYPGTKPGSVYPGSFYMQGNYLQEGLHPSSDPWASSGPLGQSGYSAMLGN
SPHIGQPGSFSAINPQDRMKRQPLPLSPQNYPLHGSEVNGSLPPGFHSGSGSYNHTPSIN
GADGIMANRGATAGSSGDEIGKALASIYPSDHNSNNFSSTPSTPVGSPQGIAGAASQWPR
PSGQSALSPNYEGQLHALQNKMEDRLEEAIHVLRSHAVQGPPGLGGGAHSDMHSLLSAVS
SAHNGGLGGLSQAFSNAGLALSNRHPAMGGNHHEEPTGLPPSSTLLHGHHASGPPQSTGQ
PDGFTSLPGSVARSTHSSSGSDIKREDKEDEENSSIADKSEDEKKETKRIRARKEALTLQ
ILSGLSGLSDPGDDPEDEDDEDLPPEVKVEREKERRVANNARERLRVRDINEAFKELGRM
CQLHLSNDKPQTKLLILHQAVNVILNLEQQVRERNLNPKAACLKRREEEKVSGVVGDSPM
QLSGGHPGMGGDGHNPVSHM
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcagcagcagcagagaatgactgcagtgggaacacaagacaaggaactcaac
gacctcctggatttcagtgcgatgtttgcaccacctgtggctaatgggaagaacagaccg
acgacactcgctagcagtcagtttggcggatcagctctggatgagcgcaatggctctgga
tcctggggcccaggagaacaaaacagcccccccttcaaccagggaaggggctacggagat
ggctcccactacaatgagcacgagggcctgtcatcccccttcctcagctcaggaatcgga
ggtaaaaatgagaggataccatactcttcctttggtggccagcccggcttcctacccagt
gacatcgccatgcccagtccagatgccatgtccccctctgggctaaagtctacctctcag
ttctaccccggatcgtaccccaacaaccccaggaggaggcctcccgatggccagctagac
acccaacccaagaagatccgcaagccccctggcctgccgtcctcggtgtatgcctcttcc
tctggggatgaatatacacgtgacaacggaggatatcctggcaccaaacctggctctgtc
tacccaggctctttctacatgcaaggtaactacttgcaagagggactccacccctcctct
gacccctgggcctcctcaggacctctgggtcagtctggctactctgccatgctggggaac
tccccccacattggccagccaggctccttctctgccatcaacccacaggacaggatgaag
cgtcaacccctacctctgtccccacagaactaccctctccatggcagtgaggtgaacggc
agcctcccacccggcttccactctggctctgggagctacaaccacacgccctccattaac
ggagcagacggcatcatggccaacagaggcgccactgcagggagctcaggggatgagatt
gggaaggctctcgcatcgatctacccctcggaccacaacagtaacaacttctcctccaca
ccctccaccccagtgggctcgccccagggaattgcaggagctgcatctcaatggccaaga
ccttcagggcagtctgccctgtcacccaactacgaagggcaactgcacgccctgcagaac
aaaatggaggaccgtctggaagaggccatccacgtgctgcgtagccacgctgtccagggc
ccgcccggcttggggggaggagcccactctgacatgcacagcctgctgagcgctgtgtca
tctgcacacaacggtggcctgggaggcctctctcaggccttctccaacgctggcctagcc
ctcagcaacagacaccctgccatgggaggaaaccatcacgaggagcccacaggccttcct
cctagcagtaccctgctgcacggtcaccacgcctccggaccccctcagtccactggacaa
cccgacggcttcaccagtctgccaggaagcgtggcccgctccacacactcgtccagtggc
tcggacatcaagagagaggacaaggaggacgaagagaactcctccatcgctgacaagtct
gaggacgagaagaaggaaaccaaacgcatcagagcaagaaaggaggcgctgaccctccag
atcctctctggcctctcaggcctgtcagacccaggagatgatccagaggatgaggatgac
gaggaccttcctcctgaggtaaaggtagagcgtgagaaagagcggcgagtggccaacaac
gcccgcgagcggctgcgagtgcgagacatcaacgaggctttcaaggagctgggccgcatg
tgccagctgcacctcagcaacgacaaacctcagaccaagctgctcatcctgcatcaagcc
gtcaacgtcattctcaacctggagcagcaagtcagagaacgcaacctgaaccctaaagca
gcgtgtctgaagcggcgggaggaggagaaggtgtctggggtggtgggggactcccccatg
cagctctcaggaggccaccccggcatggggggagacggccataacccagtcagtcatatg
taa
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