Salvelinus namaycush (lake trout): 120055420
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Entry
120055420 CDS
T07522
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F-like
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04514
Cell adhesion molecule (CAM) interaction
snh04517
IgSF CAM signaling
snh04520
Adherens junction
snh04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
120055420
04517 IgSF CAM signaling
120055420
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
120055420
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
120055420
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120055420
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
snh04515
]
120055420
Enzymes [BR:
snh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
120055420
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
120055420
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
Type II RPTP family
120055420
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_ROS1
Ig_2
ig
Fn3_VIN3
fn3_2
Ig_VEGFR-1-like_5th
PTP-SAK
Tc-R-P
Fn3_PBP1
DSPc
V-set
Y_phosphatase3
C2-set_2
fn3_SORL1
Fn3_R-PTP-O
PTP-NADK
PTPlike_phytase
Ig_5
Motif
Other DBs
NCBI-GeneID:
120055420
NCBI-ProteinID:
XP_038859210
UniProt:
A0A8U1BLV7
LinkDB
All DBs
Position
11:41536004..41754480
Genome browser
AA seq
1576 aa
AA seq
DB search
MVPNIHPAVPLLPRGAVPSLLLLLSCLVLSSQADSLPSFVKSPEDQTGISGGVASFVCQA
TGEPKPRITWMKKGKKVSSQRFEVIDFDDGCGSVLRIQPLRTHRDEAIYECTAANSGGEI
NTSAKLTVLEENQIPHGFPNIDMGPQLKVVEKTRTATMLCAASGNPDPEITWFKDFLPVD
INSSNGRIKQLRSGALQIENSEESDQGKYECVAMNSAGTRYAAPANLYVRVRRVPPRFSI
PPTNHEVMPGGSVNLTCVAVGSPMPYVKWIMGEIELTKEDEMPIGRNVLEVTNVKESANY
SCVAISSLGMIEATAQVSVKALPKPPTSLIVTETTATSVTLIWDSGNPEPVSFFMIQYRA
KATDAGFQEVDGVATTRYSIGGLSPYSEYEFRVMAVNNIGRGPPSDPVETRTGERAPSSP
PLAVQVRMLSASTMLVQWEPPEEPNGQIRGYRVYYSSDMNDPLSGWQKHNTDDSRLTTIS
GLTTDITYSLRVLGFTSVGDGPPSDVLQVKTQQGVPAQPSSFEAEAELETRIMLTWLWPV
QDTITKYELQYWDANSDNKIHVTFNPAGSYAVEGLKPDTLYLFSLAARSEFGLGVYTQPI
EARTAQSTPSAPPQEVHLSSLSSTSLKVSWVAPPAASRHGAIVAYTVSYQSTGSASEDPE
RHDVSGIGADASSYVLEGLEKWTEYQVWVRAHTDVGPGPESAPVRIKTKEDVPGAPPRKL
EVEAVNSTAIRVTWKAPLPGKQHGQIRGYQVIFSRLENGEPRGQPNIMDVALPEAQWNIE
ESTEYEATITGLHSETSYSVTVAAYTTKGDGARSKAKVITTTGAVPGRPTMMISTTMGNT
ALIQWQPPKDMVGELMGYLLQYRLQEDTAYTSRKFKRTDDHYTATELHKGATYVFRLSAQ
NRAGFGDAYVKEISTQEDVPSGYPLNLRVTGLTTSTTQLAWDPPELSERNGKILQYVVVY
RDINSHTNSTNRTLGTHMIIQGLKHDTTYDIRVQAFTSRGGGPISPSIQSRTTSTSPEDA
TFSNKSSIDPAQQFTWENSNMEVNKPKNRYANVISYDHSRVVLTSVDAVPGSDYINANYI
DGYRKQNAYIATQGPLPETLSDFWRMVWEQRAHTIVMMTRLEEKSRVKCDQYWPVRGTET
YGMIQVSMLDTVELATYSVRTFALYKNGSSEKREIRQFQFMAWPDHGVPEYPTPILAFLR
RVKACNPPDAGPMVVHCSAGVGRTGCLIVIEAMLERMKHEKSVDVYGHVTCMRAQRNYMV
QTEDQYVFIHEALLEAATCGLTEVPARNLYAHIQKLTQPPTGETVTAMELEFKRLANSKA
HTSRFISANLPCNKFKNRLVNIMPFESTRVCLQPIRGVEGSDYINASCIDGYRQQKGYLA
TQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAE
YNMPQYILREFKVTDARDGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQ
DGPITVHCSAGVGRTGVFITLSIVLERMRYEGVVDLFQTVKTLRTQRPAMVQTEDQYQLC
YRAALEYLGSFDHYAT
NT seq
4731 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacattcaccctgcagttcccctcctgcccagaggggcggtgccatccctc
ctgctgctactcagttgcctggtgctctcctctcaggctgacagcttaccaagtttcgtc
aagtctcctgaggaccagacgggtatatcgggtggtgtagcatccttcgtgtgccaggcc
acaggagagcccaaacccaggatcacttggatgaagaagggcaagaaagtcagctcccag
cgctttgaggtgattgactttgatgatggttgtgggtctgtgctgaggatccagccgctg
aggacacacagagacgaggccatatacgagtgtactgccgccaacagtggtggcgagatc
aacactagtgccaaactcaccgtgctagaagagaaccagatcccgcatgggttccccaac
atagacatgggtccccagctgaaggtggtagagaagaccaggacggccaccatgctgtgt
gctgccagcggcaaccctgacccagagatcacctggtttaaagacttcctgcctgtagac
atcaacagcagcaacggacgaatcaaacaactccgctcaggagccctacagattgagaac
agtgaggagtccgaccaggggaagtatgagtgtgttgccatgaacagtgctggaacacgc
tacgctgccccagccaacctctacgtgcgagtacgtcgtgtccctccgcggttctccatc
ccacccaccaaccatgaggtgatgcctgggggcagtgtgaacctgacgtgcgttgctgtg
ggatctcccatgccctatgtcaagtggatcatgggagaaatcgaactcaccaaggaggat
gagatgcccatcggtcggaatgttctggaggtgaccaacgtcaaggagtcagccaactac
agctgcgtggccatatcatcactgggcatgatcgaggctaccgctcaggtctcggtcaaa
gccctccccaagccccccacctctctcatagtgactgagaccacagccaccagtgtgacc
ctgatctgggactctgggaaccctgaacctgtgtccttcttcatgatccagtaccgagct
aaagccaccgacgcaggcttccaggaggtggacggagtagctaccactcgttacagcatc
ggcgggctcagcccctactcggaatacgagttccgtgtgatggcggtgaacaacattggg
cgcgggccgccctctgacccggtagagacccgtacgggggaacgggctccctcttcaccc
cctctggctgtccaggtccgtatgctgtctgcttccaccatgctggtccaatgggaaccg
cccgaggaacctaacggacagatcagagggtaccgtgtgtactacagttcagacatgaac
gaccctctgagtggctggcagaaacacaacactgacgacagcaggctgaccaccatctca
ggtctgaccactgatatcacctacagcctcagggtgctggggttcacctctgtaggggac
ggacccccctcggacgtactgcaggtcaagactcagcagggagttcctgcccaaccatcc
agcttcgaggcagaagcagagttggaaacacgtatcatgttgacctggctgtggcctgtc
caggacaccatcactaagtacgagctgcagtactgggatgctaactctgataacaagatc
cacgtgacttttaatcctgcggggtcatacgccgtggagggtctgaagcccgacaccctg
taccttttctccctggcagcccgctccgagttcggcctgggagtctacacacagcccata
gaggcgcgcaccgcccagtccaccccctccgccccccctcaggaggtgcacctgtccagt
ctaagctccacctccctcaaggtgagttgggtggccccgcccgctgcgtcccgccacggc
gccatcgtggcgtacaccgtcagctaccagtccaccggcagcgccagcgaggaccccgag
cgccacgatgtgtcagggatcggagcagacgcctctagttatgtgctggagggcctggag
aagtggacagagtaccaggtgtgggttagagctcacactgatgtgggcccgggcccagag
agcgctccggtcaggatcaaaactaaagaggacgtgccaggtgcccctcccaggaagctg
gaggtagaagctgtgaactctacagccatcagggtaacgtggaaggcccctctgccaggg
aagcagcacggccaaatcaggggctaccaggtcatcttctccaggctggagaacggggag
ccacgcggtcagcccaacatcatggacgtagccctgcctgaggctcagtggaatattgag
gagtccacagagtatgaggccaccatcactggtctgcactccgagacctcctactctgtt
accgtggcagcctacacaaccaagggagacggggcgcgtagcaaagctaaagtcatcacc
accactggagcagtcccgggtcgcccaaccatgatgatcagcaccactatgggcaacacc
gccctgatccagtggcagcctcctaaagacatggtcggagaattgatgggctatctgctg
cagtacagactccaagaggacacggcgtacacctcacggaaattcaaacggacggacgac
cactacaccgccaccgaactgcacaagggcgccacctacgtgttccggctgagtgcacaa
aaccgcgccggtttcggagacgcctatgtcaaggagatcagcacccaggaagatgtgccc
agcgggtaccccttaaacctccgtgtgacagggttgaccacgtcgaccacccagctggcg
tgggatcccccggagctgtctgagaggaacgggaagatactgcagtatgttgtggtgtac
agagacatcaacagccacaccaacagcaccaacaggacgttggggacacacatgatcatc
cagggactgaaacatgacaccacctatgacatcagagtccaggcgttcaccagcagagga
gggggacccatcagtcctagtatacagagcaggactacatctacctcgcctgaggatgcc
acattttccaacaagtcatccatagatcctgcccagcagttcacctgggagaattccaac
atggaggtgaacaaaccaaagaaccgttatgctaatgtcatctcatatgaccactccaga
gtcgtcctgacgtctgtcgatgctgttcctggtagcgactacatcaacgccaactacata
gacggctacaggaaacagaatgcctacatcgctacgcagggcccgcttcccgagaccctc
agcgacttctggaggatggtgtgggagcagagggctcacactatcgtcatgatgacacga
ctggaggagaagtcacgtgtgaagtgtgaccagtactggcctgtcagagggacagagacc
tatggtatgatacaggtcagcatgttggatactgtggagctggctacctacagcgtacgc
accttcgccctctacaagaatggttccagtgagaagcgtgagattcgtcagttccagttc
atggcctggccggaccatggggtaccagagtaccccacccccatcctggccttcctacga
cgggtcaaagcctgcaacccccctgacgctgggcccatggtggtacactgcagtgcgggc
gtgggtagaacaggctgcctgatcgtgatcgaggccatgctggagcgtatgaagcatgag
aagtcagtggatgtctacggtcatgtgacgtgtatgagagctcagagaaactacatggtg
cagaccgaggaccaatatgtcttcatccacgaggccctgctagaggcagccacctgtggc
ctcactgaggtccccgcacgcaacctgtacgcacacatccagaaactcacccagccgccc
acgggggagaccgtcaccgccatggagctggagttcaagagactggctaactccaaagcc
cacacctctaggttcatcagtgccaacctgccctgcaataagttcaagaaccggctggtg
aacatcatgcccttcgagtcgacacgcgtgtgtctgcagcctatcagaggagtggaaggg
tctgactacatcaacgccagctgcatcgatggatacagacaacagaaagggtatctggcc
acccagggccctctggctgaaaccactgaagacttctggaggatgctgtgggaacacaac
tctaccattgtagtgatgctcaccaaactcagagagatgggacgggagaagtgtcatcag
tactggccagcggagcgctcagccaggtaccagtactttgtagtggaccccatggccgag
tacaacatgccccagtacatcctccgagagttcaaagtcaccgacgccagggatggccaa
tccaggacgatccgccaattccagttcactgattggccagaacaaggagtgccaaaaacc
ggggaaggattcatcgatttcattggccaagtgcataaaaccaaggagcagtttggacag
gacggaccaatcactgttcactgcagtgccggggtgggcaggacaggggtcttcatcact
ctgagtatcgtgttggagaggatgaggtacgaaggggtggttgacctcttccagaccgtc
aagacgttacgcacccagagacctgccatggtgcagacagaggaccagtatcagctgtgc
tacagagcagcgttggagtacctggggagttttgaccactatgcaacgtaa
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integrated database retrieval system
