Salvelinus namaycush (lake trout): 120055955
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Entry
120055955 CDS
T07522
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1-like
KO
K20894
shank-associated RH domain-interacting protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120055955
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120055955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120055955
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
LUBAC complex
120055955
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120055955
NCBI-ProteinID:
XP_038859959
UniProt:
A0A8U1EIT8
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Position
Sna11:27322355..27330520
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AA seq
242 aa
AA seq
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MSSLREAHRVAANSSPHPLDDRQKHTAAVALEQRSTASLPLTEELRLELARAIEAGDSQA
AAQHASALAHQKAVLTIQLSEKSYAEGEIRLSVAVEDISSSCCVTVKVFPHMTVAALKQQ
VFLEYGFHPHVQRWVIGQCLCTEPRSLASYGVQRDGDMAYLYLISARHAHLNRQLFQQDQ
EGALLTPPPTSNGSTSQDWRGYSTLPSRLSHNSQGSTGRTADRLGMSEIREALNLGDSAD
QQ
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccctaagagaggcacacagagttgctgcaaatagttccccacatcctctggat
gaccgacagaagcacaccgctgcagtagctctagaacagcgcagcacagcctccttacca
ctcactgaggagctgcgcctggagcttgcccgggcaatcgaagcaggcgacagccaggct
gctgctcagcatgcgtctgctctggctcaccagaaggcggtgctcaccatccaactgtct
gagaagagttacgcagaaggagagatacgtttgtctgtggcagtggaggacatttcctct
tcctgttgcgtcacagtgaaagttttcccacacatgaccgtcgcagcactcaagcagcag
gtgtttctggagtatggcttccaccctcacgtgcagcgctgggtgatagggcagtgtttg
tgcacagagcccaggtccctggcctcgtatggggtccagagggatggggacatggcctac
ctctacctgatctcagcccgccatgcccacctcaaccgtcagctgttccagcaggaccag
gagggcgccctcctcaccccaccgcctaccagcaacggctctacgtcccaggactggagg
ggctacagcaccctgccctccaggctaagccacaactcccaggggagcaccggacgtacg
gctgacaggctgggtatgagcgagatcagagaggccctcaacttgggagactctgcagat
caacaataa
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